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Cluster: HRGMv2_2041_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2041_2 HRGMv2_2041_2_38 37466 40081 + GH3
pfam HRGMv2_2041_2 HRGMv2_2041_2_39 40382 41590 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2041_2 HRGMv2_2041_2_40 41584 42726 + NTP_transferase | Hexapep_GlmU
TC HRGMv2_2041_2 HRGMv2_2041_2_41 42946 44709 - 2.A.58.2.2
NULL(UNKNOWN) HRGMv2_2041_2 HRGMv2_2041_2_42 44993 45421 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2041_2 HRGMv2_2041_2_43 45603 47036 + GH32
CAZyme HRGMv2_2041_2 HRGMv2_2041_2_44 47041 48459 + GH32
Gene ID: HRGMv2_2041_2_38
Type: CAZyme
Location: 37466 - 40081 (+)
Gene ID: HRGMv2_2041_2_39
Type: pfam
Location: 40382 - 41590 (+)
Gene ID: HRGMv2_2041_2_40
Type: pfam
Location: 41584 - 42726 (+)
Gene ID: HRGMv2_2041_2_41
Type: TC
Location: 42946 - 44709 (-)
Gene ID: HRGMv2_2041_2_42
Type:
Location: 44993 - 45421 (-)
Gene ID: HRGMv2_2041_2_43
Type: CAZyme
Location: 45603 - 47036 (+)
Gene ID: HRGMv2_2041_2_44
Type: CAZyme
Location: 47041 - 48459 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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