dbCAN Logo

Genome Details

Selected Rep_genome_ID: HRGMv2_0467
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp900546345
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0467 3,337,057 98.64% 1.689% Japan Asia HRGM
Rep_245 3,257,941 93.5811% 0.788288% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0467_CGC1 CGCFAM_00001 Yes 7 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0467_CGC11 CGCFAM_00001 Yes 8 4 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0467_CGC14 CGCFAM_00001 Yes 5 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0467_CGC40 CGCFAM_00001 Yes 5 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0467_CGC10 CGCFAM_00005 Yes 6 4
HRGMv2_0467_CGC43 CGCFAM_00034 Yes 6 4
HRGMv2_0467_CGC31 CGCFAM_00044 Yes 6 1 beta-mannan/xylan/beta-glucan
HRGMv2_0467_CGC41 CGCFAM_00116 Yes 6 3 xylan/beta-glucan
HRGMv2_0467_CGC28 CGCFAM_00136 Yes 5 2 pectin
HRGMv2_0467_CGC27 CGCFAM_00146 Yes 8 4
HRGMv2_0467_CGC9 CGCFAM_00148 Yes 5 3
HRGMv2_0467_CGC2 CGCFAM_00180 Yes 10 3
HRGMv2_0467_CGC17 CGCFAM_00241 Yes 4 3
HRGMv2_0467_CGC15 CGCFAM_00468 Yes 6 1
HRGMv2_0467_CGC45 CGCFAM_00551 Yes 4 1
HRGMv2_0467_CGC25 CGCFAM_00644 Yes 4 1
HRGMv2_0467_CGC26 CGCFAM_01143 Yes 9 4
HRGMv2_0467_CGC35 CGCFAM_01798 Yes 9 1
HRGMv2_0467_CGC36 CGCFAM_02281 Yes 9 2
HRGMv2_0467_CGC34 CGCFAM_03187 Yes 4 1
HRGMv2_0467_CGC7 CGCFAM_03980 Yes 14 1
HRGMv2_0467_CGC24 CGCFAM_04743 Yes 3 1
HRGMv2_0467_CGC38 CGCFAM_06929 Yes 5 1
HRGMv2_0467_CGC4 CGCFAM_06931 Yes 6 1
HRGMv2_0467_CGC16 CGCFAM_06933 Yes 4 1
Top CAZyme Families