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Cluster: HRGMv2_0467_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0467_28 HRGMv2_0467_28_1 7 1842 - GH92
pfam HRGMv2_0467_28 HRGMv2_0467_28_2 1879 3156 - AAA_14 | DUF4143
CAZyme HRGMv2_0467_28 HRGMv2_0467_28_3 4221 6401 - GH28
pfam HRGMv2_0467_28 HRGMv2_0467_28_4 6492 8087 - SusD_RagB | SusD-like_3
TC HRGMv2_0467_28 HRGMv2_0467_28_5 8124 11117 - 1.B.14.6.1
CAZyme HRGMv2_0467_28 HRGMv2_0467_28_6 11198 12553 - GH28
pfam HRGMv2_0467_28 HRGMv2_0467_28_7 12693 13379 - RadC | UPF0758_N
pfam HRGMv2_0467_28 HRGMv2_0467_28_8 13360 14592 - Phosphodiest
CAZyme HRGMv2_0467_28 HRGMv2_0467_28_9 14623 15783 - GT2
Gene ID: HRGMv2_0467_28_1
Type: CAZyme
Location: 7 - 1842 (-)
Gene ID: HRGMv2_0467_28_2
Type: pfam
Location: 1879 - 3156 (-)
Gene ID: HRGMv2_0467_28_3
Type: CAZyme
Location: 4221 - 6401 (-)
Gene ID: HRGMv2_0467_28_4
Type: pfam
Location: 6492 - 8087 (-)
Gene ID: HRGMv2_0467_28_5
Type: TC
Location: 8124 - 11117 (-)
Gene ID: HRGMv2_0467_28_6
Type: CAZyme
Location: 11198 - 12553 (-)
Gene ID: HRGMv2_0467_28_7
Type: pfam
Location: 12693 - 13379 (-)
Gene ID: HRGMv2_0467_28_8
Type: pfam
Location: 13360 - 14592 (-)
Gene ID: HRGMv2_0467_28_9
Type: CAZyme
Location: 14623 - 15783 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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