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Cluster: HRGMv2_0467_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0467_8 HRGMv2_0467_8_3 1173 2927 - 8.A.46.2.2
TC HRGMv2_0467_8 HRGMv2_0467_8_4 2977 6156 - 1.B.14.6.2
CAZyme HRGMv2_0467_8 HRGMv2_0467_8_5 6413 7987 - CBM72 | GH5_4
TF HRGMv2_0467_8 HRGMv2_0467_8_6 8153 12208 + HTH_AraC
TC HRGMv2_0467_8 HRGMv2_0467_8_7 12470 12820 + 3.D.1.8.1
TC HRGMv2_0467_8 HRGMv2_0467_8_8 12811 13626 + 3.D.1.6.1
TC HRGMv2_0467_8 HRGMv2_0467_8_9 13642 15219 + 3.D.1.5.1
TC HRGMv2_0467_8 HRGMv2_0467_8_10 15343 16428 + 3.D.1.5.1
STP HRGMv2_0467_8 HRGMv2_0467_8_11 16442 17011 + Fer4 | Fer4
TC HRGMv2_0467_8 HRGMv2_0467_8_12 17017 17538 + 3.D.9.1.1
TC HRGMv2_0467_8 HRGMv2_0467_8_13 17535 17843 + 3.D.9.1.1
TC HRGMv2_0467_8 HRGMv2_0467_8_14 17851 19812 + 3.D.9.1.1
TC HRGMv2_0467_8 HRGMv2_0467_8_15 19849 21372 + 3.D.1.5.1
TC HRGMv2_0467_8 HRGMv2_0467_8_16 21397 22869 + 3.D.1.2.1
Gene ID: HRGMv2_0467_8_3
Type: TC
Location: 1173 - 2927 (-)
Gene ID: HRGMv2_0467_8_4
Type: TC
Location: 2977 - 6156 (-)
Gene ID: HRGMv2_0467_8_5
Type: CAZyme
Location: 6413 - 7987 (-)
Gene ID: HRGMv2_0467_8_6
Type: TF
Location: 8153 - 12208 (+)
Gene ID: HRGMv2_0467_8_7
Type: TC
Location: 12470 - 12820 (+)
Gene ID: HRGMv2_0467_8_8
Type: TC
Location: 12811 - 13626 (+)
Gene ID: HRGMv2_0467_8_9
Type: TC
Location: 13642 - 15219 (+)
Gene ID: HRGMv2_0467_8_10
Type: TC
Location: 15343 - 16428 (+)
Gene ID: HRGMv2_0467_8_11
Type: STP
Location: 16442 - 17011 (+)
Gene ID: HRGMv2_0467_8_12
Type: TC
Location: 17017 - 17538 (+)
Gene ID: HRGMv2_0467_8_13
Type: TC
Location: 17535 - 17843 (+)
Gene ID: HRGMv2_0467_8_14
Type: TC
Location: 17851 - 19812 (+)
Gene ID: HRGMv2_0467_8_15
Type: TC
Location: 19849 - 21372 (+)
Gene ID: HRGMv2_0467_8_16
Type: TC
Location: 21397 - 22869 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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