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Cluster: HRGMv2_0467_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0467_48 HRGMv2_0467_48_10 10106 12685 - GH3
NULL(UNKNOWN) HRGMv2_0467_48 HRGMv2_0467_48_11 13192 13626 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0467_48 HRGMv2_0467_48_12 13676 14299 + NTP_transf_3
TC HRGMv2_0467_48 HRGMv2_0467_48_13 14324 15616 + 2.A.1.8.15
TC HRGMv2_0467_48 HRGMv2_0467_48_14 15638 19330 + 5.A.3.1.1
TC HRGMv2_0467_48 HRGMv2_0467_48_15 19332 20837 + 5.A.3.1.1
pfam HRGMv2_0467_48 HRGMv2_0467_48_16 20884 21387 + Nitrate_red_del
TC HRGMv2_0467_48 HRGMv2_0467_48_17 21400 22068 + 5.A.3.1.2
TC HRGMv2_0467_48 HRGMv2_0467_48_18 22103 24043 + 1.B.14.4.3
Gene ID: HRGMv2_0467_48_10
Type: CAZyme
Location: 10106 - 12685 (-)
Gene ID: HRGMv2_0467_48_11
Type:
Location: 13192 - 13626 (+)
Gene ID: HRGMv2_0467_48_12
Type: pfam
Location: 13676 - 14299 (+)
Gene ID: HRGMv2_0467_48_13
Type: TC
Location: 14324 - 15616 (+)
Gene ID: HRGMv2_0467_48_14
Type: TC
Location: 15638 - 19330 (+)
Gene ID: HRGMv2_0467_48_15
Type: TC
Location: 19332 - 20837 (+)
Gene ID: HRGMv2_0467_48_16
Type: pfam
Location: 20884 - 21387 (+)
Gene ID: HRGMv2_0467_48_17
Type: TC
Location: 21400 - 22068 (+)
Gene ID: HRGMv2_0467_48_18
Type: TC
Location: 22103 - 24043 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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