dbCAN Logo

Cluster: HRGMv2_0467_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0467_4 HRGMv2_0467_4_38 41306 43162 + 3.A.1.106.1
sulfatase HRGMv2_0467_4 HRGMv2_0467_4_39 43301 45292 + S1_27
pfam HRGMv2_0467_4 HRGMv2_0467_4_40 45289 46263 + Lip_A_acyltrans
CAZyme HRGMv2_0467_4 HRGMv2_0467_4_41 46306 47145 + GT11
CAZyme HRGMv2_0467_4 HRGMv2_0467_4_42 47193 48239 + GT2
CAZyme HRGMv2_0467_4 HRGMv2_0467_4_43 48413 49561 + GT4
pfam HRGMv2_0467_4 HRGMv2_0467_4_44 49647 50324 + DUF4294
TC HRGMv2_0467_4 HRGMv2_0467_4_45 50366 51853 + 3.A.1.3.15
TC HRGMv2_0467_4 HRGMv2_0467_4_46 51843 52574 + 3.A.1.3.15
TC HRGMv2_0467_4 HRGMv2_0467_4_47 52686 54110 + 2.A.25.1.5
Gene ID: HRGMv2_0467_4_38
Type: TC
Location: 41306 - 43162 (+)
Gene ID: HRGMv2_0467_4_39
Type: sulfatase
Location: 43301 - 45292 (+)
Gene ID: HRGMv2_0467_4_40
Type: pfam
Location: 45289 - 46263 (+)
Gene ID: HRGMv2_0467_4_41
Type: CAZyme
Location: 46306 - 47145 (+)
Gene ID: HRGMv2_0467_4_42
Type: CAZyme
Location: 47193 - 48239 (+)
Gene ID: HRGMv2_0467_4_43
Type: CAZyme
Location: 48413 - 49561 (+)
Gene ID: HRGMv2_0467_4_44
Type: pfam
Location: 49647 - 50324 (+)
Gene ID: HRGMv2_0467_4_45
Type: TC
Location: 50366 - 51853 (+)
Gene ID: HRGMv2_0467_4_46
Type: TC
Location: 51843 - 52574 (+)
Gene ID: HRGMv2_0467_4_47
Type: TC
Location: 52686 - 54110 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List