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Cluster: HRGMv2_0467_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0467_30 HRGMv2_0467_30_1 56 661 - 9.B.171.1.2
TF HRGMv2_0467_30 HRGMv2_0467_30_2 938 2689 + HTH_AraC
NULL(UNKNOWN) HRGMv2_0467_30 HRGMv2_0467_30_3 3045 4055 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0467_30 HRGMv2_0467_30_4 4225 5217 - GH43_1
CAZyme HRGMv2_0467_30 HRGMv2_0467_30_5 5333 6451 - GH10
TC HRGMv2_0467_30 HRGMv2_0467_30_6 6524 7957 - 2.A.2.3.2
CAZyme HRGMv2_0467_30 HRGMv2_0467_30_7 8128 10119 + GH67
CAZyme HRGMv2_0467_30 HRGMv2_0467_30_8 10116 11882 + GH35
Gene ID: HRGMv2_0467_30_1
Type: TC
Location: 56 - 661 (-)
Gene ID: HRGMv2_0467_30_2
Type: TF
Location: 938 - 2689 (+)
Gene ID: HRGMv2_0467_30_3
Type:
Location: 3045 - 4055 (+)
Gene ID: HRGMv2_0467_30_4
Type: CAZyme
Location: 4225 - 5217 (-)
Gene ID: HRGMv2_0467_30_5
Type: CAZyme
Location: 5333 - 6451 (-)
Gene ID: HRGMv2_0467_30_6
Type: TC
Location: 6524 - 7957 (-)
Gene ID: HRGMv2_0467_30_7
Type: CAZyme
Location: 8128 - 10119 (+)
Gene ID: HRGMv2_0467_30_8
Type: CAZyme
Location: 10116 - 11882 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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