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Cluster: HRGMv2_0467_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0467_53 HRGMv2_0467_53_2 1326 4499 + 1.B.14.6.1
pfam HRGMv2_0467_53 HRGMv2_0467_53_3 4556 6346 + SusD_RagB | SusD-like_3
pfam HRGMv2_0467_53 HRGMv2_0467_53_4 6395 8005 + SGBP_B_XBD
CAZyme HRGMv2_0467_53 HRGMv2_0467_53_5 8024 9523 + GH5_4
CAZyme HRGMv2_0467_53 HRGMv2_0467_53_6 9729 11186 + CE20
TC HRGMv2_0467_53 HRGMv2_0467_53_7 11326 12711 - 9.B.18.1.1
TC HRGMv2_0467_53 HRGMv2_0467_53_8 12908 14134 + 9.B.156.3.1
pfam HRGMv2_0467_53 HRGMv2_0467_53_9 14138 15631 + Polysacc_synt
TC HRGMv2_0467_53 HRGMv2_0467_53_10 16480 18363 + 3.A.18.1.1
Gene ID: HRGMv2_0467_53_2
Type: TC
Location: 1326 - 4499 (+)
Gene ID: HRGMv2_0467_53_3
Type: pfam
Location: 4556 - 6346 (+)
Gene ID: HRGMv2_0467_53_4
Type: pfam
Location: 6395 - 8005 (+)
Gene ID: HRGMv2_0467_53_5
Type: CAZyme
Location: 8024 - 9523 (+)
Gene ID: HRGMv2_0467_53_6
Type: CAZyme
Location: 9729 - 11186 (+)
Gene ID: HRGMv2_0467_53_7
Type: TC
Location: 11326 - 12711 (-)
Gene ID: HRGMv2_0467_53_8
Type: TC
Location: 12908 - 14134 (+)
Gene ID: HRGMv2_0467_53_9
Type: pfam
Location: 14138 - 15631 (+)
Gene ID: HRGMv2_0467_53_10
Type: TC
Location: 16480 - 18363 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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