Genome Details
Selected Rep_genome_ID: HRGMv2_0356
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900549375
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0356 | 2,914,756 | 96.66% | 0.503% | UK | Europe | HRGM |
| MGYG000004830 | 2,642,212 | 95.16% | 0.38% | China | Asia | UHGG |
| Rep_316 | 2,689,504 | 94.7799% | 0.377358% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0356_CGC20 | CGCFAM_00017 | Yes | 15 | 4 | fructan |
| HRGMv2_0356_CGC27 | CGCFAM_00023 | Yes | 5 | 2 | |
| HRGMv2_0356_CGC14 | CGCFAM_00165 | Yes | 10 | 1 | |
| HRGMv2_0356_CGC15 | CGCFAM_00296 | Yes | 14 | 4 | |
| HRGMv2_0356_CGC21 | CGCFAM_00320 | Yes | 4 | 1 | |
| HRGMv2_0356_CGC7 | CGCFAM_00356 | Yes | 7 | 1 | |
| HRGMv2_0356_CGC8 | CGCFAM_00556 | Yes | 4 | 1 | |
| HRGMv2_0356_CGC4 | CGCFAM_00582 | Yes | 8 | 2 | arabinogalactan |
| HRGMv2_0356_CGC30 | CGCFAM_00623 | Yes | 9 | 2 | |
| HRGMv2_0356_CGC1 | CGCFAM_00997 | Yes | 3 | 1 | |
| HRGMv2_0356_CGC9 | CGCFAM_01208 | Yes | 3 | 2 | |
| HRGMv2_0356_CGC23 | CGCFAM_01227 | Yes | 5 | 1 | |
| HRGMv2_0356_CGC16 | CGCFAM_01396 | Yes | 12 | 3 | |
| HRGMv2_0356_CGC5 | CGCFAM_01787 | Yes | 6 | 1 | |
| HRGMv2_0356_CGC6 | CGCFAM_01788 | Yes | 6 | 1 | |
| HRGMv2_0356_CGC11 | CGCFAM_02230 | Yes | 9 | 1 | |
| HRGMv2_0356_CGC17 | CGCFAM_03997 | Yes | 4 | 1 | |
| HRGMv2_0356_CGC24 | CGCFAM_05562 | Yes | 5 | 2 | |
| HRGMv2_0356_CGC18 | CGCFAM_05922 | Yes | 4 | 1 | |
| HRGMv2_0356_CGC2 | CGCFAM_08754 | Yes | 3 | 1 |
Top CAZyme Families