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Cluster: HRGMv2_0356_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0356_10 HRGMv2_0356_10_74 84052 85395 - 3.A.5.1.1
pfam HRGMv2_0356_10 HRGMv2_0356_10_75 85466 85816 - Asp_decarbox
pfam HRGMv2_0356_10 HRGMv2_0356_10_76 85862 86719 - Pantoate_ligase
CAZyme HRGMv2_0356_10 HRGMv2_0356_10_77 86941 87759 + GT5
pfam HRGMv2_0356_10 HRGMv2_0356_10_78 87801 89225 + DUF4270
pfam HRGMv2_0356_10 HRGMv2_0356_10_79 89222 90313 + PGA_cap
TC HRGMv2_0356_10 HRGMv2_0356_10_80 90376 91965 + 3.A.1.121.4
peptidase HRGMv2_0356_10 HRGMv2_0356_10_81 92182 99978 - S08.UPA
NULL(UNKNOWN) HRGMv2_0356_10 HRGMv2_0356_10_82 100338 101612 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0356_10 HRGMv2_0356_10_83 101630 103441 - 3.A.1.120.6
Gene ID: HRGMv2_0356_10_74
Type: TC
Location: 84052 - 85395 (-)
Gene ID: HRGMv2_0356_10_75
Type: pfam
Location: 85466 - 85816 (-)
Gene ID: HRGMv2_0356_10_76
Type: pfam
Location: 85862 - 86719 (-)
Gene ID: HRGMv2_0356_10_77
Type: CAZyme
Location: 86941 - 87759 (+)
Gene ID: HRGMv2_0356_10_78
Type: pfam
Location: 87801 - 89225 (+)
Gene ID: HRGMv2_0356_10_79
Type: pfam
Location: 89222 - 90313 (+)
Gene ID: HRGMv2_0356_10_80
Type: TC
Location: 90376 - 91965 (+)
Gene ID: HRGMv2_0356_10_81
Type: peptidase
Location: 92182 - 99978 (-)
Gene ID: HRGMv2_0356_10_82
Type:
Location: 100338 - 101612 (+)
Gene ID: HRGMv2_0356_10_83
Type: TC
Location: 101630 - 103441 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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