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Cluster: HRGMv2_0356_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0356_8 HRGMv2_0356_8_90 112260 113639 - 2.A.1.4.6
pfam HRGMv2_0356_8 HRGMv2_0356_8_91 113653 114549 - GDPD | DUF4996
pfam HRGMv2_0356_8 HRGMv2_0356_8_92 114746 115690 + QueG_DUF1730 | Fer4_16
CAZyme HRGMv2_0356_8 HRGMv2_0356_8_93 115692 116711 - GH53
pfam HRGMv2_0356_8 HRGMv2_0356_8_94 116811 117818 - Gp_dh_N | Gp_dh_C
TC HRGMv2_0356_8 HRGMv2_0356_8_95 118130 118570 + 1.A.22.1.3
pfam HRGMv2_0356_8 HRGMv2_0356_8_96 118578 121934 - DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter
peptidase HRGMv2_0356_8 HRGMv2_0356_8_97 121931 123625 - S41.UPA
TC HRGMv2_0356_8 HRGMv2_0356_8_98 123622 125235 - 3.D.10.1.4
Gene ID: HRGMv2_0356_8_90
Type: TC
Location: 112260 - 113639 (-)
Gene ID: HRGMv2_0356_8_91
Type: pfam
Location: 113653 - 114549 (-)
Gene ID: HRGMv2_0356_8_92
Type: pfam
Location: 114746 - 115690 (+)
Gene ID: HRGMv2_0356_8_93
Type: CAZyme
Location: 115692 - 116711 (-)
Gene ID: HRGMv2_0356_8_94
Type: pfam
Location: 116811 - 117818 (-)
Gene ID: HRGMv2_0356_8_95
Type: TC
Location: 118130 - 118570 (+)
Gene ID: HRGMv2_0356_8_96
Type: pfam
Location: 118578 - 121934 (-)
Gene ID: HRGMv2_0356_8_97
Type: peptidase
Location: 121931 - 123625 (-)
Gene ID: HRGMv2_0356_8_98
Type: TC
Location: 123622 - 125235 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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