Cluster: HRGMv2_0356_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0356
- CGC Family ID: CGCFAM_01227
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0356_20 | HRGMv2_0356_20_32 | 37473 | 39029 | + | 2.A.1.4.11 |
| pfam | HRGMv2_0356_20 | HRGMv2_0356_20_33 | 39029 | 39895 | + | Hydrolase | PGP_phosphatase | Hydrolase_like | Hydrolase_6 |
| CAZyme | HRGMv2_0356_20 | HRGMv2_0356_20_34 | 39987 | 42149 | + | GH36 |
| pfam | HRGMv2_0356_20 | HRGMv2_0356_20_35 | 42282 | 42905 | - | DUF179 |
| TC | HRGMv2_0356_20 | HRGMv2_0356_20_36 | 43032 | 43880 | + | 3.A.1.148.4 |
Gene ID: HRGMv2_0356_20_32
Type: TC
Location: 37473 - 39029 (+)
Type: TC
Location: 37473 - 39029 (+)
Gene ID: HRGMv2_0356_20_33
Type: pfam
Location: 39029 - 39895 (+)
Type: pfam
Location: 39029 - 39895 (+)
Gene ID: HRGMv2_0356_20_34
Type: CAZyme
Location: 39987 - 42149 (+)
Type: CAZyme
Location: 39987 - 42149 (+)
Gene ID: HRGMv2_0356_20_35
Type: pfam
Location: 42282 - 42905 (-)
Type: pfam
Location: 42282 - 42905 (-)
Gene ID: HRGMv2_0356_20_36
Type: TC
Location: 43032 - 43880 (+)
Type: TC
Location: 43032 - 43880 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900549375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.