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Cluster: HRGMv2_0356_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0356_30 HRGMv2_0356_30_6 7961 9778 + 4.C.1.1.14
pfam HRGMv2_0356_30 HRGMv2_0356_30_7 9792 10904 + RF-1 | PCRF
CAZyme HRGMv2_0356_30 HRGMv2_0356_30_8 10867 11934 - GT9
pfam HRGMv2_0356_30 HRGMv2_0356_30_9 11918 12529 - DUF4254
TC HRGMv2_0356_30 HRGMv2_0356_30_10 12631 13467 - 1.A.30.1.4
TC HRGMv2_0356_30 HRGMv2_0356_30_11 13609 15051 + 2.A.3.2.7
NULL(UNKNOWN) HRGMv2_0356_30 HRGMv2_0356_30_12 15078 16007 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0356_30 HRGMv2_0356_30_13 16140 16343 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0356_30 HRGMv2_0356_30_14 16584 19112 - GH13
Gene ID: HRGMv2_0356_30_6
Type: TC
Location: 7961 - 9778 (+)
Gene ID: HRGMv2_0356_30_7
Type: pfam
Location: 9792 - 10904 (+)
Gene ID: HRGMv2_0356_30_8
Type: CAZyme
Location: 10867 - 11934 (-)
Gene ID: HRGMv2_0356_30_9
Type: pfam
Location: 11918 - 12529 (-)
Gene ID: HRGMv2_0356_30_10
Type: TC
Location: 12631 - 13467 (-)
Gene ID: HRGMv2_0356_30_11
Type: TC
Location: 13609 - 15051 (+)
Gene ID: HRGMv2_0356_30_12
Type:
Location: 15078 - 16007 (-)
Gene ID: HRGMv2_0356_30_13
Type:
Location: 16140 - 16343 (-)
Gene ID: HRGMv2_0356_30_14
Type: CAZyme
Location: 16584 - 19112 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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