dbCAN Logo

Cluster: HRGMv2_0356_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0356_16 HRGMv2_0356_16_29 21065 21412 + 2.A.1.1.3
CAZyme HRGMv2_0356_16 HRGMv2_0356_16_30 21371 22891 - GH30_2
CAZyme HRGMv2_0356_16 HRGMv2_0356_16_31 22906 25245 - GH2
CAZyme HRGMv2_0356_16 HRGMv2_0356_16_32 25658 26692 + GH43_34
sulfatase HRGMv2_0356_16 HRGMv2_0356_16_33 26695 27924 + S1_48
STP HRGMv2_0356_16 HRGMv2_0356_16_34 28034 28912 - PfkB
TC HRGMv2_0356_16 HRGMv2_0356_16_35 28925 30103 - 2.A.1.7.17
CAZyme HRGMv2_0356_16 HRGMv2_0356_16_36 30115 31950 - GH32
TF HRGMv2_0356_16 HRGMv2_0356_16_37 32185 34920 + HTH_AraC
TC HRGMv2_0356_16 HRGMv2_0356_16_38 35058 38180 + 1.B.14.6.1
pfam HRGMv2_0356_16 HRGMv2_0356_16_39 38199 39935 + SusD_RagB | SusD-like_3
TC HRGMv2_0356_16 HRGMv2_0356_16_40 39936 41045 - 3.A.1.105.4
TC HRGMv2_0356_16 HRGMv2_0356_16_41 41047 42096 - 3.A.1.105.15
TC HRGMv2_0356_16 HRGMv2_0356_16_42 42100 42843 - 3.A.1.105.4
TC HRGMv2_0356_16 HRGMv2_0356_16_43 42836 43747 - 3.A.1.105.15
Gene ID: HRGMv2_0356_16_29
Type: TC
Location: 21065 - 21412 (+)
Gene ID: HRGMv2_0356_16_30
Type: CAZyme
Location: 21371 - 22891 (-)
Gene ID: HRGMv2_0356_16_31
Type: CAZyme
Location: 22906 - 25245 (-)
Gene ID: HRGMv2_0356_16_32
Type: CAZyme
Location: 25658 - 26692 (+)
Gene ID: HRGMv2_0356_16_33
Type: sulfatase
Location: 26695 - 27924 (+)
Gene ID: HRGMv2_0356_16_34
Type: STP
Location: 28034 - 28912 (-)
Gene ID: HRGMv2_0356_16_35
Type: TC
Location: 28925 - 30103 (-)
Gene ID: HRGMv2_0356_16_36
Type: CAZyme
Location: 30115 - 31950 (-)
Gene ID: HRGMv2_0356_16_37
Type: TF
Location: 32185 - 34920 (+)
Gene ID: HRGMv2_0356_16_38
Type: TC
Location: 35058 - 38180 (+)
Gene ID: HRGMv2_0356_16_39
Type: pfam
Location: 38199 - 39935 (+)
Gene ID: HRGMv2_0356_16_40
Type: TC
Location: 39936 - 41045 (-)
Gene ID: HRGMv2_0356_16_41
Type: TC
Location: 41047 - 42096 (-)
Gene ID: HRGMv2_0356_16_42
Type: TC
Location: 42100 - 42843 (-)
Gene ID: HRGMv2_0356_16_43
Type: TC
Location: 42836 - 43747 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List