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Genome Details

Selected Rep_genome_ID: HRGMv2_0222
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp945873145
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0222 3,617,806 97.07% 1.295% South Korea Asia HRGM
Rep_250 3,608,031 97.6782% 3.29392% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0222_CGC19 CGCFAM_00001 Yes 4 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0222_CGC43 CGCFAM_00003 Yes 4 2
HRGMv2_0222_CGC8 CGCFAM_00023 Yes 5 1
HRGMv2_0222_CGC15 CGCFAM_00028 Yes 4 3
HRGMv2_0222_CGC6 CGCFAM_00034 Yes 12 4
HRGMv2_0222_CGC10 CGCFAM_00043 Yes 6 2 alpha-glucan
HRGMv2_0222_CGC16 CGCFAM_00116 Yes 7 2 xylan/beta-glucan
HRGMv2_0222_CGC9 CGCFAM_00146 Yes 4 3
HRGMv2_0222_CGC11 CGCFAM_00180 Yes 7 4
HRGMv2_0222_CGC37 CGCFAM_00468 Yes 7 1
HRGMv2_0222_CGC38 CGCFAM_00820 Yes 4 1 beta-glucan
HRGMv2_0222_CGC2 CGCFAM_00830 Yes 5 2 pectin
HRGMv2_0222_CGC21 CGCFAM_01035 Yes 4 1
HRGMv2_0222_CGC3 CGCFAM_01072 Yes 8 2
HRGMv2_0222_CGC27 CGCFAM_01084 Yes 3 1
HRGMv2_0222_CGC17 CGCFAM_01143 Yes 10 5
HRGMv2_0222_CGC25 CGCFAM_01607 Yes 5 2
HRGMv2_0222_CGC33 CGCFAM_01798 Yes 9 1
HRGMv2_0222_CGC34 CGCFAM_01845 Yes 4 1
HRGMv2_0222_CGC28 CGCFAM_02471 Yes 6 1
HRGMv2_0222_CGC1 CGCFAM_02472 Yes 9 4
HRGMv2_0222_CGC39 CGCFAM_02934 Yes 4 1
HRGMv2_0222_CGC46 CGCFAM_03003 Yes 3 1
HRGMv2_0222_CGC31 CGCFAM_03186 Yes 4 1
HRGMv2_0222_CGC4 CGCFAM_03980 Yes 14 1
Top CAZyme Families