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Cluster: HRGMv2_0222_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0222_2 HRGMv2_0222_2_11 27646 30927 + 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0222_2 HRGMv2_0222_2_12 30951 32708 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0222_2 HRGMv2_0222_2_13 32803 35202 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0222_2 HRGMv2_0222_2_14 35394 36521 + GH43_24
NULL(UNKNOWN) HRGMv2_0222_2 HRGMv2_0222_2_15 36650 36814 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0222_2 HRGMv2_0222_2_16 36946 39405 - GH31_4
TC HRGMv2_0222_2 HRGMv2_0222_2_17 39691 41325 - 8.A.46.1.1
TC HRGMv2_0222_2 HRGMv2_0222_2_18 41349 44585 - 1.B.14.6.1
Gene ID: HRGMv2_0222_2_11
Type: TC
Location: 27646 - 30927 (+)
Gene ID: HRGMv2_0222_2_12
Type:
Location: 30951 - 32708 (+)
Gene ID: HRGMv2_0222_2_13
Type:
Location: 32803 - 35202 (+)
Gene ID: HRGMv2_0222_2_14
Type: CAZyme
Location: 35394 - 36521 (+)
Gene ID: HRGMv2_0222_2_15
Type:
Location: 36650 - 36814 (+)
Gene ID: HRGMv2_0222_2_16
Type: CAZyme
Location: 36946 - 39405 (-)
Gene ID: HRGMv2_0222_2_17
Type: TC
Location: 39691 - 41325 (-)
Gene ID: HRGMv2_0222_2_18
Type: TC
Location: 41349 - 44585 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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