PROTEIN: HRGMv2_0222_2_12
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Protein File & Metadata
Source:
HRGMv2_0222_2_12.pdb
Genome ID:
Protein ID:
HRGMv2_0222_2_12
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Detailed structural information will appear here after analysis...
Protein Sequence
MKAKYILCLL LMQVAVLFGS CTDFFDQDSD HVQYTDDYRL HEPGDTIYAL TGIMNKMQAL 60 GDRTILLGEL RGDLVDVTAN ASADLRGIAD FDINDDNAFN SPKDYYAVIN NCNLYIARCD 120 TAVKNNRGEK LFYKEYAAVK AYRAWTYLQL ALNYGKVPFV TTPITTEAEA NANYETKDLQ 180 GICQYFIADL TPLVDVPYPG LGTIGSVDSR LLYFPISWLL GDLNLWAGNY KQAALDYYHF 240 ISTANGANSY FQLGANSVMF TNPSWNLRYA TLPLGSETYS SGRSVVTMIA GDSIPSQGNY 300 SQLRNYFNAN ENNDFKASIT PSKGMQALSA SQKYCYMDPK LGAKATPIIA PSDLSNNLAG 360 DLRLSYIWST GNSSYNGKRI STQSIRKYMT RNIAIYTRPM VYLRLAEALN RAGYPRFAFQ 420 ILARGVNNDV IGEYVLPYCH TASDSAFVSQ FNFPSTANTG YIVRDITSNT NYNTIGIHSR 480 GCGWTEFNPY YQFPTDSQVS DTLSYQIEKV EDLIMDENAL ECCFQGTRFY DLMRVALRRN 540 DPAYLADRVY KRDGLNNVGT VKGTIKKDLY DPKNWYLSFK GKIGL 585
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A414WUJ8 | GH16 | 32 | 585 | 33 | 884 | 0.5319 |
0.6788 |
| U6RU08 | PL8 | 27 | 585 | 44 | 584 | 0.4324 |
0.6969 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A414WUJ8 | GH16 | 32 | 585 | 33 | 884 | 0.5319 |
0.6788 |
| U6RU08 | PL8 | 27 | 585 | 44 | 584 | 0.4324 |
0.6969 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3kez-assembly1.cif.gz_A | 37 | 585 | 1 | 444 | 0.7097 |
0.8191 |
| 3l22-assembly1.cif.gz_A | 34 | 585 | 1 | 429 | 0.7083 |
0.826 |
| 3jq1-assembly1.cif.gz_A | 35 | 585 | 1 | 460 | 0.7071 |
0.8029 |
| 3jq1-assembly2.cif.gz_B | 35 | 585 | 1 | 462 | 0.7068 |
0.8012 |
| 3mcx-assembly1.cif.gz_A | 41 | 585 | 1 | 457 | 0.7003 |
0.7974 |
| 3myv-assembly2.cif.gz_B | 40 | 585 | 1 | 440 | 0.6989 |
0.8106 |
| 3hdx-assembly1.cif.gz_A | 33 | 585 | 1 | 452 | 0.6904 |
0.792 |
| 3ihv-assembly1.cif.gz_A | 27 | 585 | 1 | 532 | 0.6882 |
0.7359 |
| 3qnk-assembly2.cif.gz_C | 28 | 585 | 1 | 508 | 0.6867 |
0.7489 |
| 3snx-assembly2.cif.gz_B | 39 | 585 | 1 | 455 | 0.6858 |
0.7808 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-T2KN63-F1-model_v4 | 29 | 585 | 25 | 503 | 0.6968 |
0.7971 |
| AF-T2KPM5-F1-model_v4 | 32 | 585 | 33 | 500 | 0.6761 |
0.7882 |
| AF-T2KNB8-F1-model_v4 | 32 | 585 | 29 | 524 | 0.6752 |
0.7625 |
| AF-A7LXT5-F1-model_v4 | 26 | 585 | 28 | 538 | 0.6452 |
0.7232 |
| AF-Q8A1G2-F1-model_v4 | 21 | 585 | 26 | 547 | 0.6292 |
0.694 |