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Cluster: HRGMv2_0222_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0222_8 HRGMv2_0222_8_4 4685 5803 - GT4
CAZyme HRGMv2_0222_8 HRGMv2_0222_8_5 5969 6754 + GT2
CAZyme HRGMv2_0222_8 HRGMv2_0222_8_6 6857 7870 - GT2
CAZyme HRGMv2_0222_8 HRGMv2_0222_8_7 7935 8771 - GT11
pfam HRGMv2_0222_8 HRGMv2_0222_8_8 8814 9788 - Lip_A_acyltrans
sulfatase HRGMv2_0222_8 HRGMv2_0222_8_9 9785 11776 - S1_27
TC HRGMv2_0222_8 HRGMv2_0222_8_10 11799 13655 - 3.A.1.106.1
Gene ID: HRGMv2_0222_8_4
Type: CAZyme
Location: 4685 - 5803 (-)
Gene ID: HRGMv2_0222_8_5
Type: CAZyme
Location: 5969 - 6754 (+)
Gene ID: HRGMv2_0222_8_6
Type: CAZyme
Location: 6857 - 7870 (-)
Gene ID: HRGMv2_0222_8_7
Type: CAZyme
Location: 7935 - 8771 (-)
Gene ID: HRGMv2_0222_8_8
Type: pfam
Location: 8814 - 9788 (-)
Gene ID: HRGMv2_0222_8_9
Type: sulfatase
Location: 9785 - 11776 (-)
Gene ID: HRGMv2_0222_8_10
Type: TC
Location: 11799 - 13655 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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