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Cluster: HRGMv2_0222_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0222_2 HRGMv2_0222_2_23 49910 51664 - 8.A.46.2.2
TC HRGMv2_0222_2 HRGMv2_0222_2_24 51714 54893 - 1.B.14.6.13
CAZyme HRGMv2_0222_2 HRGMv2_0222_2_25 55149 56828 - CBM72 | GH5_4
TF HRGMv2_0222_2 HRGMv2_0222_2_26 56995 61149 + HTH_AraC
TC HRGMv2_0222_2 HRGMv2_0222_2_27 61410 61760 + 3.D.1.8.1
TC HRGMv2_0222_2 HRGMv2_0222_2_28 61751 62566 + 3.D.1.6.1
TC HRGMv2_0222_2 HRGMv2_0222_2_29 62582 64159 + 3.D.1.5.1
TC HRGMv2_0222_2 HRGMv2_0222_2_30 64279 65364 + 3.D.1.5.1
STP HRGMv2_0222_2 HRGMv2_0222_2_31 65378 65947 + Fer4 | Fer4
TC HRGMv2_0222_2 HRGMv2_0222_2_32 65953 66474 + 3.D.9.1.1
TC HRGMv2_0222_2 HRGMv2_0222_2_33 66471 66779 + 3.D.9.1.1
TC HRGMv2_0222_2 HRGMv2_0222_2_34 66787 68748 + 3.D.9.1.1
TC HRGMv2_0222_2 HRGMv2_0222_2_35 68785 70308 + 3.D.1.5.1
TC HRGMv2_0222_2 HRGMv2_0222_2_36 70333 71805 + 3.D.1.2.1
Gene ID: HRGMv2_0222_2_23
Type: TC
Location: 49910 - 51664 (-)
Gene ID: HRGMv2_0222_2_24
Type: TC
Location: 51714 - 54893 (-)
Gene ID: HRGMv2_0222_2_25
Type: CAZyme
Location: 55149 - 56828 (-)
Gene ID: HRGMv2_0222_2_26
Type: TF
Location: 56995 - 61149 (+)
Gene ID: HRGMv2_0222_2_27
Type: TC
Location: 61410 - 61760 (+)
Gene ID: HRGMv2_0222_2_28
Type: TC
Location: 61751 - 62566 (+)
Gene ID: HRGMv2_0222_2_29
Type: TC
Location: 62582 - 64159 (+)
Gene ID: HRGMv2_0222_2_30
Type: TC
Location: 64279 - 65364 (+)
Gene ID: HRGMv2_0222_2_31
Type: STP
Location: 65378 - 65947 (+)
Gene ID: HRGMv2_0222_2_32
Type: TC
Location: 65953 - 66474 (+)
Gene ID: HRGMv2_0222_2_33
Type: TC
Location: 66471 - 66779 (+)
Gene ID: HRGMv2_0222_2_34
Type: TC
Location: 66787 - 68748 (+)
Gene ID: HRGMv2_0222_2_35
Type: TC
Location: 68785 - 70308 (+)
Gene ID: HRGMv2_0222_2_36
Type: TC
Location: 70333 - 71805 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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