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Cluster: HRGMv2_0222_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0222_4 HRGMv2_0222_4_11 13816 14451 + 2.A.124.1.4
STP HRGMv2_0222_4 HRGMv2_0222_4_12 14754 15803 - NUDIX
CAZyme HRGMv2_0222_4 HRGMv2_0222_4_13 15974 17800 - GH13_46
CAZyme HRGMv2_0222_4 HRGMv2_0222_4_14 17826 19682 - GH13_14
CAZyme HRGMv2_0222_4 HRGMv2_0222_4_15 19835 22003 - GH97
CAZyme HRGMv2_0222_4 HRGMv2_0222_4_16 22229 24925 - GH77
pfam HRGMv2_0222_4 HRGMv2_0222_4_17 25159 25731 - PAP2
TC HRGMv2_0222_4 HRGMv2_0222_4_18 25851 27161 - 2.A.2.6.2
TF HRGMv2_0222_4 HRGMv2_0222_4_19 27258 28259 - LacI
NULL(UNKNOWN) HRGMv2_0222_4 HRGMv2_0222_4_20 28921 29943 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0222_4 HRGMv2_0222_4_21 30890 33958 + 1.B.14.6.1
TC HRGMv2_0222_4 HRGMv2_0222_4_22 33987 35699 + 8.A.46.1.1
Gene ID: HRGMv2_0222_4_11
Type: TC
Location: 13816 - 14451 (+)
Gene ID: HRGMv2_0222_4_12
Type: STP
Location: 14754 - 15803 (-)
Gene ID: HRGMv2_0222_4_13
Type: CAZyme
Location: 15974 - 17800 (-)
Gene ID: HRGMv2_0222_4_14
Type: CAZyme
Location: 17826 - 19682 (-)
Gene ID: HRGMv2_0222_4_15
Type: CAZyme
Location: 19835 - 22003 (-)
Gene ID: HRGMv2_0222_4_16
Type: CAZyme
Location: 22229 - 24925 (-)
Gene ID: HRGMv2_0222_4_17
Type: pfam
Location: 25159 - 25731 (-)
Gene ID: HRGMv2_0222_4_18
Type: TC
Location: 25851 - 27161 (-)
Gene ID: HRGMv2_0222_4_19
Type: TF
Location: 27258 - 28259 (-)
Gene ID: HRGMv2_0222_4_20
Type:
Location: 28921 - 29943 (+)
Gene ID: HRGMv2_0222_4_21
Type: TC
Location: 30890 - 33958 (+)
Gene ID: HRGMv2_0222_4_22
Type: TC
Location: 33987 - 35699 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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