Genome Details
Selected Rep_genome_ID: HRGMv2_0213
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp900545245
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR087960 | 2,816,946 | 92.22% | 0.24% | China | Asia | CGMR |
| GCA_021634205.1_ASM2163420v1_genomic | 3,101,278 | 91.98% | 0.48% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_0213 | 3,003,212 | 92.46% | 0% | Tanzania | Africa | HRGM |
| MGYG000000722 | 2,915,024 | 91.98% | 0% | Kazakhstan | Asia | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_J_2_2306.68 | 3,071,273 | 92.46% | 0% | NA | Africa | Hadza |
| Rep_52 | 2,972,206 | 92.4603% | 0.714286% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0213_CGC15 | CGCFAM_00001 | Yes | 8 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0213_CGC3 | CGCFAM_00001 | Yes | 6 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0213_CGC26 | CGCFAM_00016 | Yes | 8 | 1 | host glycan |
| HRGMv2_0213_CGC27 | CGCFAM_00016 | Yes | 8 | 2 | host glycan |
| HRGMv2_0213_CGC10 | CGCFAM_00023 | Yes | 4 | 1 | |
| HRGMv2_0213_CGC41 | CGCFAM_00079 | Yes | 5 | 1 | pectin |
| HRGMv2_0213_CGC28 | CGCFAM_00095 | Yes | 7 | 4 | |
| HRGMv2_0213_CGC42 | CGCFAM_00158 | Yes | 6 | 1 | |
| HRGMv2_0213_CGC5 | CGCFAM_00213 | Yes | 6 | 2 | beta-glucan |
| HRGMv2_0213_CGC44 | CGCFAM_00758 | Yes | 3 | 1 | |
| HRGMv2_0213_CGC11 | CGCFAM_00828 | Yes | 11 | 6 | |
| HRGMv2_0213_CGC20 | CGCFAM_01445 | Yes | 11 | 4 | |
| HRGMv2_0213_CGC34 | CGCFAM_02846 | Yes | 3 | 1 | |
| HRGMv2_0213_CGC47 | CGCFAM_03979 | Yes | 3 | 1 | |
| HRGMv2_0213_CGC40 | CGCFAM_05165 | Yes | 4 | 2 | |
| HRGMv2_0213_CGC37 | CGCFAM_05938 | Yes | 9 | 4 | |
| HRGMv2_0213_CGC18 | CGCFAM_09389 | Yes | 4 | 1 | |
| HRGMv2_0213_CGC32 | CGCFAM_09390 | Yes | 13 | 7 | |
| HRGMv2_0213_CGC24 | CGCFAM_09540 | Yes | 4 | 1 |
Top CAZyme Families