Cluster: HRGMv2_0213_CGC32
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_0213
- CGC Family ID: CGCFAM_09390
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0213_18 | HRGMv2_0213_18_3 | 3257 | 4798 | - | 2.A.47.1.12 |
| NULL(UNKNOWN) | HRGMv2_0213_18 | HRGMv2_0213_18_4 | 4795 | 4911 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0213_18 | HRGMv2_0213_18_5 | 4958 | 7939 | - | GH115 |
| pfam | HRGMv2_0213_18 | HRGMv2_0213_18_6 | 7929 | 9185 | - | Big_2 |
| pfam | HRGMv2_0213_18 | HRGMv2_0213_18_7 | 9210 | 11039 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0213_18 | HRGMv2_0213_18_8 | 11052 | 14162 | - | 1.B.14.6.2 |
| CAZyme | HRGMv2_0213_18 | HRGMv2_0213_18_9 | 14210 | 15679 | - | GH105 |
| CAZyme | HRGMv2_0213_18 | HRGMv2_0213_18_10 | 15676 | 16845 | - | GH105 |
| CAZyme | HRGMv2_0213_18 | HRGMv2_0213_18_11 | 16879 | 18372 | - | GH43_26 |
| CAZyme | HRGMv2_0213_18 | HRGMv2_0213_18_12 | 18381 | 20408 | - | GH182 |
| TF | HRGMv2_0213_18 | HRGMv2_0213_18_13 | 20566 | 24546 | + | HTH_AraC |
| CAZyme | HRGMv2_0213_18 | HRGMv2_0213_18_14 | 24564 | 27254 | + | GH2 |
| CAZyme | HRGMv2_0213_18 | HRGMv2_0213_18_15 | 27257 | 30211 | + | GH130_3 |
Gene ID: HRGMv2_0213_18_3
Type: TC
Location: 3257 - 4798 (-)
Type: TC
Location: 3257 - 4798 (-)
Gene ID: HRGMv2_0213_18_4
Type:
Location: 4795 - 4911 (-)
Type:
Location: 4795 - 4911 (-)
Gene ID: HRGMv2_0213_18_5
Type: CAZyme
Location: 4958 - 7939 (-)
Type: CAZyme
Location: 4958 - 7939 (-)
Gene ID: HRGMv2_0213_18_6
Type: pfam
Location: 7929 - 9185 (-)
Type: pfam
Location: 7929 - 9185 (-)
Gene ID: HRGMv2_0213_18_7
Type: pfam
Location: 9210 - 11039 (-)
Type: pfam
Location: 9210 - 11039 (-)
Gene ID: HRGMv2_0213_18_8
Type: TC
Location: 11052 - 14162 (-)
Type: TC
Location: 11052 - 14162 (-)
Gene ID: HRGMv2_0213_18_9
Type: CAZyme
Location: 14210 - 15679 (-)
Type: CAZyme
Location: 14210 - 15679 (-)
Gene ID: HRGMv2_0213_18_10
Type: CAZyme
Location: 15676 - 16845 (-)
Type: CAZyme
Location: 15676 - 16845 (-)
Gene ID: HRGMv2_0213_18_11
Type: CAZyme
Location: 16879 - 18372 (-)
Type: CAZyme
Location: 16879 - 18372 (-)
Gene ID: HRGMv2_0213_18_12
Type: CAZyme
Location: 18381 - 20408 (-)
Type: CAZyme
Location: 18381 - 20408 (-)
Gene ID: HRGMv2_0213_18_13
Type: TF
Location: 20566 - 24546 (+)
Type: TF
Location: 20566 - 24546 (+)
Gene ID: HRGMv2_0213_18_14
Type: CAZyme
Location: 24564 - 27254 (+)
Type: CAZyme
Location: 24564 - 27254 (+)
Gene ID: HRGMv2_0213_18_15
Type: CAZyme
Location: 27257 - 30211 (+)
Type: CAZyme
Location: 27257 - 30211 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp900545245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.