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Cluster: HRGMv2_0213_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0213_7 HRGMv2_0213_7_10 11733 13745 - GH20
CAZyme HRGMv2_0213_7 HRGMv2_0213_7_11 13798 16104 - GH3
NULL(UNKNOWN) HRGMv2_0213_7 HRGMv2_0213_7_12 16110 17057 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0213_7 HRGMv2_0213_7_13 17071 17199 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0213_7 HRGMv2_0213_7_14 17238 18125 - GH16_3
NULL(UNKNOWN) HRGMv2_0213_7 HRGMv2_0213_7_15 18136 19581 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0213_7 HRGMv2_0213_7_16 19683 21221 - SusD_RagB | SusD-like_3
TC HRGMv2_0213_7 HRGMv2_0213_7_17 21235 24666 - 1.B.14.6.1
Gene ID: HRGMv2_0213_7_10
Type: CAZyme
Location: 11733 - 13745 (-)
Gene ID: HRGMv2_0213_7_11
Type: CAZyme
Location: 13798 - 16104 (-)
Gene ID: HRGMv2_0213_7_12
Type:
Location: 16110 - 17057 (-)
Gene ID: HRGMv2_0213_7_13
Type:
Location: 17071 - 17199 (-)
Gene ID: HRGMv2_0213_7_14
Type: CAZyme
Location: 17238 - 18125 (-)
Gene ID: HRGMv2_0213_7_15
Type:
Location: 18136 - 19581 (-)
Gene ID: HRGMv2_0213_7_16
Type: pfam
Location: 19683 - 21221 (-)
Gene ID: HRGMv2_0213_7_17
Type: TC
Location: 21235 - 24666 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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