PROTEIN: HRGMv2_0213_7_12
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Protein File & Metadata
Source:
HRGMv2_0213_7_12.pdb
Genome ID:
Protein ID:
HRGMv2_0213_7_12
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Protein Sequence
MKRLETLCIA GAVAVLAVSC GKEEAVREDG ASKVGFTAAE LQVKTVFGEK ADGEYPVLWT 60 SNEKVALFYN SQTGDQGWTN GGQYVAVNPS ADGHTAGFSA SFTDDGSRSH SFYAMSPLSA 120 LKWMGNEDLD GNGVNEKILY ANIPPDQIPV PGTCDEKAQI VFAKEEFSEF PDKVDLTFSH 180 MTAYGLITSL SLPEEATKIV GLTIESDKFL SGEIYCNYNT PETILCNAKT AQKYIYLDVN 240 NGGLKAKTLE NVFFACTPQT DGNDVFGEGD YLKFTVYTDT DTWVKTVNFS ADRTLAFKTG 300 RISSFSVSAH GFEKQ 315
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D6D2Z1-F1-model_v4 | GH27 | 26 | 315 | 27 | 299 | 0.488 |
0.8162 |
| D7J4K2 | GH27 | 13 | 315 | 20 | 299 | 0.4873 |
0.7959 |
| AF-Q8ABP5-F1-model_v4 | GH27 | 25 | 315 | 31 | 299 | 0.4598 |
0.7789 |
| A0A412C4E4 | PL0 | 24 | 313 | 39 | 377 | 0.4488 |
0.6408 |
| AF-A0A4V0ZPZ7-F1-model_v4 | GH18 | 27 | 312 | 26 | 291 | 0.4077 |
0.688 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D7J4K2 | GH27 | 13 | 315 | 20 | 299 | 0.4873 |
0.7959 |
| A0A4V0ZPZ7 | GH18 | 27 | 312 | 26 | 291 | 0.4077 |
0.688 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3ufi-assembly1.cif.gz_A | 26 | 312 | 1 | 264 | 0.6067 |
0.6991 |
| 3t2l-assembly1.cif.gz_A-2 | 27 | 312 | 1 | 263 | 0.5939 |
0.6867 |
| 3r4r-assembly1.cif.gz_A | 29 | 311 | 3 | 258 | 0.5623 |
0.662 |
| 4dgu-assembly1.cif.gz_A | 32 | 311 | 1 | 221 | 0.553 |
0.6863 |
| 4dgu-assembly1.cif.gz_B | 27 | 311 | 2 | 213 | 0.5477 |
0.6929 |
| 3pay-assembly1.cif.gz_D | 21 | 314 | 7 | 294 | 0.5265 |
0.5974 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A6L3B5-F1-model_v4 | 20 | 311 | 25 | 353 | 0.553 |
0.6645 |