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Cluster: HRGMv2_0213_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0213_13 HRGMv2_0213_13_16 16544 18970 - GH31_15
pfam HRGMv2_0213_13 HRGMv2_0213_13_17 19043 21007 - CotH
pfam HRGMv2_0213_13 HRGMv2_0213_13_18 21222 22898 - Laminin_G_3
CAZyme HRGMv2_0213_13 HRGMv2_0213_13_19 22938 24644 - GH18
pfam HRGMv2_0213_13 HRGMv2_0213_13_20 24694 25932 - BT_3987-like_N | Laminin_G_3
pfam HRGMv2_0213_13 HRGMv2_0213_13_21 25946 26944 - GH18_BT1044-like
TC HRGMv2_0213_13 HRGMv2_0213_13_22 26995 28611 - 8.A.46.2.2
TC HRGMv2_0213_13 HRGMv2_0213_13_23 28645 32034 - 1.B.14.6.13
Gene ID: HRGMv2_0213_13_16
Type: CAZyme
Location: 16544 - 18970 (-)
Gene ID: HRGMv2_0213_13_17
Type: pfam
Location: 19043 - 21007 (-)
Gene ID: HRGMv2_0213_13_18
Type: pfam
Location: 21222 - 22898 (-)
Gene ID: HRGMv2_0213_13_19
Type: CAZyme
Location: 22938 - 24644 (-)
Gene ID: HRGMv2_0213_13_20
Type: pfam
Location: 24694 - 25932 (-)
Gene ID: HRGMv2_0213_13_21
Type: pfam
Location: 25946 - 26944 (-)
Gene ID: HRGMv2_0213_13_22
Type: TC
Location: 26995 - 28611 (-)
Gene ID: HRGMv2_0213_13_23
Type: TC
Location: 28645 - 32034 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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