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Cluster: HRGMv2_0213_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0213_15 HRGMv2_0213_15_16 16455 18164 - 8.A.46.1.3
TC HRGMv2_0213_15 HRGMv2_0213_15_17 18177 21365 - 1.B.14.6.1
CAZyme HRGMv2_0213_15 HRGMv2_0213_15_18 21427 24366 - PL8_2
CAZyme HRGMv2_0213_15 HRGMv2_0213_15_19 24511 25815 + GH88
CAZyme HRGMv2_0213_15 HRGMv2_0213_15_20 25854 28940 + PL8_2
sulfatase HRGMv2_0213_15 HRGMv2_0213_15_21 28996 30546 + S1_27
CAZyme HRGMv2_0213_15 HRGMv2_0213_15_22 30551 33058 + PL29
Gene ID: HRGMv2_0213_15_16
Type: TC
Location: 16455 - 18164 (-)
Gene ID: HRGMv2_0213_15_17
Type: TC
Location: 18177 - 21365 (-)
Gene ID: HRGMv2_0213_15_18
Type: CAZyme
Location: 21427 - 24366 (-)
Gene ID: HRGMv2_0213_15_19
Type: CAZyme
Location: 24511 - 25815 (+)
Gene ID: HRGMv2_0213_15_20
Type: CAZyme
Location: 25854 - 28940 (+)
Gene ID: HRGMv2_0213_15_21
Type: sulfatase
Location: 28996 - 30546 (+)
Gene ID: HRGMv2_0213_15_22
Type: CAZyme
Location: 30551 - 33058 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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