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Cluster: HRGMv2_0213_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0213_12 HRGMv2_0213_12_5 4275 5864 - GH18
pfam HRGMv2_0213_12 HRGMv2_0213_12_6 5877 7175 - BT_3987-like_N | Laminin_G_3
pfam HRGMv2_0213_12 HRGMv2_0213_12_7 7204 8058 - GH18_BT1044-like
TC HRGMv2_0213_12 HRGMv2_0213_12_8 8068 9642 - 8.A.46.2.2
TC HRGMv2_0213_12 HRGMv2_0213_12_9 9667 12996 - 1.B.14.6.13
STP HRGMv2_0213_12 HRGMv2_0213_12_10 13063 14034 - FecR
STP HRGMv2_0213_12 HRGMv2_0213_12_11 14193 14762 + Sigma70_r4_2
TC HRGMv2_0213_12 HRGMv2_0213_12_12 14899 15852 - 2.A.19.5.2
Gene ID: HRGMv2_0213_12_5
Type: CAZyme
Location: 4275 - 5864 (-)
Gene ID: HRGMv2_0213_12_6
Type: pfam
Location: 5877 - 7175 (-)
Gene ID: HRGMv2_0213_12_7
Type: pfam
Location: 7204 - 8058 (-)
Gene ID: HRGMv2_0213_12_8
Type: TC
Location: 8068 - 9642 (-)
Gene ID: HRGMv2_0213_12_9
Type: TC
Location: 9667 - 12996 (-)
Gene ID: HRGMv2_0213_12_10
Type: STP
Location: 13063 - 14034 (-)
Gene ID: HRGMv2_0213_12_11
Type: STP
Location: 14193 - 14762 (+)
Gene ID: HRGMv2_0213_12_12
Type: TC
Location: 14899 - 15852 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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