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Cluster: HRGMv2_0213_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0213_9 HRGMv2_0213_9_53 67309 69750 + GH77
TF HRGMv2_0213_9 HRGMv2_0213_9_54 69756 70544 - LytTR
TC HRGMv2_0213_9 HRGMv2_0213_9_55 70562 71962 - 8.A.59.2.1
TC HRGMv2_0213_9 HRGMv2_0213_9_56 72163 73497 + 2.A.2.6.3
TC HRGMv2_0213_9 HRGMv2_0213_9_57 73505 76474 + 1.B.14.6.1
pfam HRGMv2_0213_9 HRGMv2_0213_9_58 76484 78289 + SusD_RagB | SusD-like_2 | SusD-like_3
pfam HRGMv2_0213_9 HRGMv2_0213_9_59 78363 79811 + SusF_SusE
CAZyme HRGMv2_0213_9 HRGMv2_0213_9_60 79963 82266 + GH13
pfam HRGMv2_0213_9 HRGMv2_0213_9_61 82282 83751 + CotH
CAZyme HRGMv2_0213_9 HRGMv2_0213_9_62 83796 85022 + GH13
CAZyme HRGMv2_0213_9 HRGMv2_0213_9_63 85074 86996 + GH13_46
Gene ID: HRGMv2_0213_9_53
Type: CAZyme
Location: 67309 - 69750 (+)
Gene ID: HRGMv2_0213_9_54
Type: TF
Location: 69756 - 70544 (-)
Gene ID: HRGMv2_0213_9_55
Type: TC
Location: 70562 - 71962 (-)
Gene ID: HRGMv2_0213_9_56
Type: TC
Location: 72163 - 73497 (+)
Gene ID: HRGMv2_0213_9_57
Type: TC
Location: 73505 - 76474 (+)
Gene ID: HRGMv2_0213_9_58
Type: pfam
Location: 76484 - 78289 (+)
Gene ID: HRGMv2_0213_9_59
Type: pfam
Location: 78363 - 79811 (+)
Gene ID: HRGMv2_0213_9_60
Type: CAZyme
Location: 79963 - 82266 (+)
Gene ID: HRGMv2_0213_9_61
Type: pfam
Location: 82282 - 83751 (+)
Gene ID: HRGMv2_0213_9_62
Type: CAZyme
Location: 83796 - 85022 (+)
Gene ID: HRGMv2_0213_9_63
Type: CAZyme
Location: 85074 - 86996 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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