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Cluster: HRGMv2_0213_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0213_24 HRGMv2_0213_24_1 53 1996 + GH16_3
NULL(UNKNOWN) HRGMv2_0213_24 HRGMv2_0213_24_2 1999 4209 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0213_24 HRGMv2_0213_24_3 4219 7404 + 1.B.14.6.1
TC HRGMv2_0213_24 HRGMv2_0213_24_4 7439 9202 + 8.A.46.1.3
pfam HRGMv2_0213_24 HRGMv2_0213_24_5 9227 10309 + DUF5017
pfam HRGMv2_0213_24 HRGMv2_0213_24_6 10332 11945 + ADP_ribosyl_GH
CAZyme HRGMv2_0213_24 HRGMv2_0213_24_7 11923 15498 + CE15 | GH95
CAZyme HRGMv2_0213_24 HRGMv2_0213_24_8 15520 18366 + GH3
CAZyme HRGMv2_0213_24 HRGMv2_0213_24_9 18398 20419 + GH97
Gene ID: HRGMv2_0213_24_1
Type: CAZyme
Location: 53 - 1996 (+)
Gene ID: HRGMv2_0213_24_2
Type:
Location: 1999 - 4209 (+)
Gene ID: HRGMv2_0213_24_3
Type: TC
Location: 4219 - 7404 (+)
Gene ID: HRGMv2_0213_24_4
Type: TC
Location: 7439 - 9202 (+)
Gene ID: HRGMv2_0213_24_5
Type: pfam
Location: 9227 - 10309 (+)
Gene ID: HRGMv2_0213_24_6
Type: pfam
Location: 10332 - 11945 (+)
Gene ID: HRGMv2_0213_24_7
Type: CAZyme
Location: 11923 - 15498 (+)
Gene ID: HRGMv2_0213_24_8
Type: CAZyme
Location: 15520 - 18366 (+)
Gene ID: HRGMv2_0213_24_9
Type: CAZyme
Location: 18398 - 20419 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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