Genome Details
Selected Rep_genome_ID: HRGMv2_0160
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp002480935
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0160 | 3,404,472 | 98.93% | 0.011% | Luxembourg | Europe | HRGM |
| MGYG000004561 | 3,001,921 | 98.55% | 0% | France | Europe | UHGG |
| SW144_bin.47 | 2,646,126 | 91.04% | 0.53% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0160_CGC3 | CGCFAM_00075 | Yes | 4 | 1 | |
| HRGMv2_0160_CGC12 | CGCFAM_00081 | Yes | 11 | 1 | |
| HRGMv2_0160_CGC47 | CGCFAM_00186 | Yes | 4 | 1 | |
| HRGMv2_0160_CGC10 | CGCFAM_00306 | Yes | 4 | 2 | |
| HRGMv2_0160_CGC16 | CGCFAM_00468 | Yes | 6 | 1 | |
| HRGMv2_0160_CGC31 | CGCFAM_01309 | Yes | 6 | 3 | |
| HRGMv2_0160_CGC21 | CGCFAM_01972 | Yes | 3 | 1 | |
| HRGMv2_0160_CGC22 | CGCFAM_02955 | Yes | 6 | 4 | |
| HRGMv2_0160_CGC27 | CGCFAM_04177 | Yes | 6 | 5 | |
| HRGMv2_0160_CGC25 | CGCFAM_04555 | Yes | 7 | 3 | |
| HRGMv2_0160_CGC34 | CGCFAM_05800 | Yes | 8 | 2 | |
| HRGMv2_0160_CGC43 | CGCFAM_06747 | Yes | 4 | 2 | |
| HRGMv2_0160_CGC32 | CGCFAM_09078 | Yes | 10 | 4 | |
| HRGMv2_0160_CGC14 | CGCFAM_09079 | Yes | 11 | 4 | |
| HRGMv2_0160_CGC18 | CGCFAM_09080 | Yes | 4 | 2 | |
| HRGMv2_0160_CGC30 | CGCFAM_09082 | Yes | 6 | 1 | |
| HRGMv2_0160_CGC42 | CGCFAM_09083 | Yes | 11 | 3 | |
| HRGMv2_0160_CGC46 | CGCFAM_09084 | Yes | 6 | 2 | |
| HRGMv2_0160_CGC9 | CGCFAM_09085 | Yes | 5 | 3 | |
| HRGMv2_0160_CGC41 | CGCFAM_09086 | Yes | 12 | 6 | |
| HRGMv2_0160_CGC1 | CGCFAM_09088 | Yes | 6 | 2 |
Top CAZyme Families