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Cluster: HRGMv2_0160_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0160_12 HRGMv2_0160_12_46 56413 58287 + CE12
CAZyme HRGMv2_0160_12 HRGMv2_0160_12_47 58348 61593 + CE8
TC HRGMv2_0160_12 HRGMv2_0160_12_48 61680 62357 + 9.B.20.1.4
NULL(UNKNOWN) HRGMv2_0160_12 HRGMv2_0160_12_49 62366 62773 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0160_12 HRGMv2_0160_12_50 63265 63654 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0160_12 HRGMv2_0160_12_51 64063 67284 + 1.B.14.6.1
TC HRGMv2_0160_12 HRGMv2_0160_12_52 67341 68933 + 8.A.46.1.2
CAZyme HRGMv2_0160_12 HRGMv2_0160_12_53 69025 70224 + PL22_2
NULL(UNKNOWN) HRGMv2_0160_12 HRGMv2_0160_12_54 70655 71353 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0160_12 HRGMv2_0160_12_55 71761 72474 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0160_12 HRGMv2_0160_12_56 72492 74390 - PL10_1
Gene ID: HRGMv2_0160_12_46
Type: CAZyme
Location: 56413 - 58287 (+)
Gene ID: HRGMv2_0160_12_47
Type: CAZyme
Location: 58348 - 61593 (+)
Gene ID: HRGMv2_0160_12_48
Type: TC
Location: 61680 - 62357 (+)
Gene ID: HRGMv2_0160_12_49
Type:
Location: 62366 - 62773 (-)
Gene ID: HRGMv2_0160_12_50
Type:
Location: 63265 - 63654 (+)
Gene ID: HRGMv2_0160_12_51
Type: TC
Location: 64063 - 67284 (+)
Gene ID: HRGMv2_0160_12_52
Type: TC
Location: 67341 - 68933 (+)
Gene ID: HRGMv2_0160_12_53
Type: CAZyme
Location: 69025 - 70224 (+)
Gene ID: HRGMv2_0160_12_54
Type:
Location: 70655 - 71353 (-)
Gene ID: HRGMv2_0160_12_55
Type:
Location: 71761 - 72474 (+)
Gene ID: HRGMv2_0160_12_56
Type: CAZyme
Location: 72492 - 74390 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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