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Cluster: HRGMv2_0160_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0160_23 HRGMv2_0160_23_37 36535 37560 + GH73
CAZyme HRGMv2_0160_23 HRGMv2_0160_23_38 37746 40304 - GT35
CAZyme HRGMv2_0160_23 HRGMv2_0160_23_39 40328 42034 - GT3
NULL(UNKNOWN) HRGMv2_0160_23 HRGMv2_0160_23_40 42076 42537 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0160_23 HRGMv2_0160_23_41 43042 44178 - Metallophos
TC HRGMv2_0160_23 HRGMv2_0160_23_42 44288 46981 + 1.B.14.6.1
TC HRGMv2_0160_23 HRGMv2_0160_23_43 47006 48658 + 8.A.46.1.1
Gene ID: HRGMv2_0160_23_37
Type: CAZyme
Location: 36535 - 37560 (+)
Gene ID: HRGMv2_0160_23_38
Type: CAZyme
Location: 37746 - 40304 (-)
Gene ID: HRGMv2_0160_23_39
Type: CAZyme
Location: 40328 - 42034 (-)
Gene ID: HRGMv2_0160_23_40
Type:
Location: 42076 - 42537 (+)
Gene ID: HRGMv2_0160_23_41
Type: pfam
Location: 43042 - 44178 (-)
Gene ID: HRGMv2_0160_23_42
Type: TC
Location: 44288 - 46981 (+)
Gene ID: HRGMv2_0160_23_43
Type: TC
Location: 47006 - 48658 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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