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Cluster: HRGMv2_0160_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0160_28 HRGMv2_0160_28_15 19044 19883 - GT23
pfam HRGMv2_0160_28 HRGMv2_0160_28_16 20078 20806 - TauE
pfam HRGMv2_0160_28 HRGMv2_0160_28_17 20882 21685 - Lactamase_B | Lactamase_B_2
TC HRGMv2_0160_28 HRGMv2_0160_28_18 21699 23174 - 2.A.13.1.2
pfam HRGMv2_0160_28 HRGMv2_0160_28_19 23455 23823 + Desulfoferrodox | Desulfoferrod_N
pfam HRGMv2_0160_28 HRGMv2_0160_28_20 24126 25484 - DUF6080
CAZyme HRGMv2_0160_28 HRGMv2_0160_28_21 25632 26522 + GT2
pfam HRGMv2_0160_28 HRGMv2_0160_28_22 26515 27447 + Glycos_transf_2
CAZyme HRGMv2_0160_28 HRGMv2_0160_28_23 27444 28391 - GT2
CAZyme HRGMv2_0160_28 HRGMv2_0160_28_24 28391 29419 - GT113
Gene ID: HRGMv2_0160_28_15
Type: CAZyme
Location: 19044 - 19883 (-)
Gene ID: HRGMv2_0160_28_16
Type: pfam
Location: 20078 - 20806 (-)
Gene ID: HRGMv2_0160_28_17
Type: pfam
Location: 20882 - 21685 (-)
Gene ID: HRGMv2_0160_28_18
Type: TC
Location: 21699 - 23174 (-)
Gene ID: HRGMv2_0160_28_19
Type: pfam
Location: 23455 - 23823 (+)
Gene ID: HRGMv2_0160_28_20
Type: pfam
Location: 24126 - 25484 (-)
Gene ID: HRGMv2_0160_28_21
Type: CAZyme
Location: 25632 - 26522 (+)
Gene ID: HRGMv2_0160_28_22
Type: pfam
Location: 26515 - 27447 (+)
Gene ID: HRGMv2_0160_28_23
Type: CAZyme
Location: 27444 - 28391 (-)
Gene ID: HRGMv2_0160_28_24
Type: CAZyme
Location: 28391 - 29419 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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