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Cluster: HRGMv2_0160_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0160_9 HRGMv2_0160_9_53 67894 70938 - GH2
TC HRGMv2_0160_9 HRGMv2_0160_9_54 71155 72615 - 3.D.9.1.1
TC HRGMv2_0160_9 HRGMv2_0160_9_55 72627 74135 - 3.D.1.5.1
TC HRGMv2_0160_9 HRGMv2_0160_9_56 74143 76119 - 3.D.9.1.1
TC HRGMv2_0160_9 HRGMv2_0160_9_57 76132 76440 - 3.D.9.1.1
pfam HRGMv2_0160_9 HRGMv2_0160_9_58 76437 76976 - Oxidored_q3
STP HRGMv2_0160_9 HRGMv2_0160_9_59 76983 77558 - Fer4 | Fer4
TC HRGMv2_0160_9 HRGMv2_0160_9_60 77577 78677 - 3.D.1.5.1
TC HRGMv2_0160_9 HRGMv2_0160_9_61 78685 80259 - 3.D.1.5.1
TC HRGMv2_0160_9 HRGMv2_0160_9_62 80272 81033 - 3.D.1.6.1
TC HRGMv2_0160_9 HRGMv2_0160_9_63 81024 81386 - 3.D.1.8.1
Gene ID: HRGMv2_0160_9_53
Type: CAZyme
Location: 67894 - 70938 (-)
Gene ID: HRGMv2_0160_9_54
Type: TC
Location: 71155 - 72615 (-)
Gene ID: HRGMv2_0160_9_55
Type: TC
Location: 72627 - 74135 (-)
Gene ID: HRGMv2_0160_9_56
Type: TC
Location: 74143 - 76119 (-)
Gene ID: HRGMv2_0160_9_57
Type: TC
Location: 76132 - 76440 (-)
Gene ID: HRGMv2_0160_9_58
Type: pfam
Location: 76437 - 76976 (-)
Gene ID: HRGMv2_0160_9_59
Type: STP
Location: 76983 - 77558 (-)
Gene ID: HRGMv2_0160_9_60
Type: TC
Location: 77577 - 78677 (-)
Gene ID: HRGMv2_0160_9_61
Type: TC
Location: 78685 - 80259 (-)
Gene ID: HRGMv2_0160_9_62
Type: TC
Location: 80272 - 81033 (-)
Gene ID: HRGMv2_0160_9_63
Type: TC
Location: 81024 - 81386 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0160_9_57 vegetarian > omnivore 1.14464 0.03101

🧭 Explore Read Mapping of CGC

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