Cluster: HRGMv2_0160_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0160
- CGC Family ID: CGCFAM_00468
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0160_14 | HRGMv2_0160_14_35 | 41567 | 43120 | - | 2.A.114.1.4 |
| pfam | HRGMv2_0160_14 | HRGMv2_0160_14_36 | 43221 | 44876 | + | GHL10 | GHL10 |
| pfam | HRGMv2_0160_14 | HRGMv2_0160_14_37 | 45444 | 46718 | - | DZR | Zn_Ribbon_1 |
| CAZyme | HRGMv2_0160_14 | HRGMv2_0160_14_38 | 46753 | 47451 | - | GH25 |
| NULL(UNKNOWN) | HRGMv2_0160_14 | HRGMv2_0160_14_39 | 47566 | 48384 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0160_14 | HRGMv2_0160_14_40 | 48388 | 49671 | - | 2.A.35.1.5 |
Gene ID: HRGMv2_0160_14_35
Type: TC
Location: 41567 - 43120 (-)
Type: TC
Location: 41567 - 43120 (-)
Gene ID: HRGMv2_0160_14_36
Type: pfam
Location: 43221 - 44876 (+)
Type: pfam
Location: 43221 - 44876 (+)
Gene ID: HRGMv2_0160_14_37
Type: pfam
Location: 45444 - 46718 (-)
Type: pfam
Location: 45444 - 46718 (-)
Gene ID: HRGMv2_0160_14_38
Type: CAZyme
Location: 46753 - 47451 (-)
Type: CAZyme
Location: 46753 - 47451 (-)
Gene ID: HRGMv2_0160_14_39
Type:
Location: 47566 - 48384 (-)
Type:
Location: 47566 - 48384 (-)
Gene ID: HRGMv2_0160_14_40
Type: TC
Location: 48388 - 49671 (-)
Type: TC
Location: 48388 - 49671 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp002480935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.