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Cluster: HRGMv2_0160_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0160_32 HRGMv2_0160_32_11 13693 14241 + 2.A.51.1.6
TC HRGMv2_0160_32 HRGMv2_0160_32_12 14245 14820 + 2.A.51.1.6
pfam HRGMv2_0160_32 HRGMv2_0160_32_13 14861 15892 + Endonuclease_NS
pfam HRGMv2_0160_32 HRGMv2_0160_32_14 15892 16773 + EamA | EamA
CAZyme HRGMv2_0160_32 HRGMv2_0160_32_15 16902 18923 + GH13_6
CAZyme HRGMv2_0160_32 HRGMv2_0160_32_16 18950 20197 + GH53
pfam HRGMv2_0160_32 HRGMv2_0160_32_17 20954 21877 - Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8
TC HRGMv2_0160_32 HRGMv2_0160_32_18 21884 23575 - 3.A.1.117.3
Gene ID: HRGMv2_0160_32_11
Type: TC
Location: 13693 - 14241 (+)
Gene ID: HRGMv2_0160_32_12
Type: TC
Location: 14245 - 14820 (+)
Gene ID: HRGMv2_0160_32_13
Type: pfam
Location: 14861 - 15892 (+)
Gene ID: HRGMv2_0160_32_14
Type: pfam
Location: 15892 - 16773 (+)
Gene ID: HRGMv2_0160_32_15
Type: CAZyme
Location: 16902 - 18923 (+)
Gene ID: HRGMv2_0160_32_16
Type: CAZyme
Location: 18950 - 20197 (+)
Gene ID: HRGMv2_0160_32_17
Type: pfam
Location: 20954 - 21877 (-)
Gene ID: HRGMv2_0160_32_18
Type: TC
Location: 21884 - 23575 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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