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Genome Details

Selected Rep_genome_ID: CGMR062874
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
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Family
Bacteroidaceae
→
Genus
Bacteroides
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Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR062874 6,002,009 90.24% 1.59% China Asia CGMR
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
CGMR062874_CGC40 CGCFAM_00001 Yes 8 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR062874_CGC100 CGCFAM_00016 Yes 12 4 host glycan
CGMR062874_CGC48 CGCFAM_00016 Yes 6 2 host glycan
CGMR062874_CGC96 CGCFAM_00016 Yes 9 3 host glycan
PUL0425_CGMR062874_C1 CGCFAM_00017 Yes 9 4 fructan
CGMR062874_CGC20 CGCFAM_00031 Yes 9 4 pectin/galactan
CGMR062874_CGC33 CGCFAM_00044 Yes 16 6 beta-mannan/xylan/beta-glucan
CGMR062874_CGC16 CGCFAM_00050 Yes 5 2
CGMR062874_CGC99 CGCFAM_00062 Yes 8 3 beta-glucan
CGMR062874_CGC64 CGCFAM_00068 Yes 7 2
CGMR062874_CGC91 CGCFAM_00070 Yes 7 4
CGMR062874_CGC88 CGCFAM_00111 Yes 5 2 alpha-glucan
CGMR062874_CGC4 CGCFAM_00116 Yes 10 4 xylan/beta-glucan
CGMR062874_CGC12 CGCFAM_00147 Yes 4 1
CGMR062874_CGC17 CGCFAM_00189 Yes 6 1
CGMR062874_CGC102 CGCFAM_00212 Yes 11 6 arabinogalactan/pectin
CGMR062874_CGC21 CGCFAM_00219 Yes 5 2 host glycan
CGMR062874_CGC5 CGCFAM_00238 Yes 26 16 xylan
CGMR062874_CGC106 CGCFAM_00251 Yes 4 1
CGMR062874_CGC1 CGCFAM_00256 Yes 13 3
CGMR062874_CGC7 CGCFAM_00256 Yes 9 4
CGMR062874_CGC54 CGCFAM_00265 Yes 5 1 beta-glucan
CGMR062874_CGC85 CGCFAM_00265 Yes 7 5 beta-glucan
CGMR062874_CGC50 CGCFAM_00297 Yes 14 4
CGMR062874_CGC37 CGCFAM_00306 Yes 3 2
Top CAZyme Families