Cluster: CGMR062874_CGC5
🧬 Cluster Details
- Gene Count: 26
- CAZyme Count: 16
- Substrate: xylan
- Genome ID: CGMR062874
- CGC Family ID: CGCFAM_00238
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_131816 | k141_131816_14 | 25353 | 26744 | + | CBM6 | GH43_29 |
| CAZyme | k141_131816 | k141_131816_15 | 26758 | 28080 | + | CBM6 | GH43_29 |
| CAZyme | k141_131816 | k141_131816_16 | 28102 | 30537 | + | GH95 |
| TF | k141_131816 | k141_131816_17 | 31107 | 35126 | + | 0035607 | 0036286 |
| CAZyme | k141_131816 | k141_131816_18 | 35189 | 36019 | - | CE6 |
| CAZyme | k141_131816 | k141_131816_19 | 36078 | 36953 | - | CE1 |
| CAZyme | k141_131816 | k141_131816_20 | 36960 | 38339 | - | CBM6 | GH43_29 |
| NULL(UNKNOWN) | k141_131816 | k141_131816_21 | 38377 | 38478 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_131816 | k141_131816_22 | 38510 | 42061 | - | CE6 | GH5_21 |
| pfam | k141_131816 | k141_131816_23 | 42091 | 43128 | - | BT_3987-like_N | DUF5627 |
| pfam | k141_131816 | k141_131816_24 | 43160 | 44920 | - | SusD_RagB | SusD-like_3 |
| TC | k141_131816 | k141_131816_25 | 44942 | 47752 | - | 1.B.14.6.1 |
| pfam | k141_131816 | k141_131816_26 | 47790 | 49610 | - | SusD_RagB | SusD-like_3 |
| TC | k141_131816 | k141_131816_27 | 49624 | 52728 | - | 1.B.14.6.1 |
| CAZyme | k141_131816 | k141_131816_28 | 52862 | 54580 | - | CBM91 | GH43_12 |
| CAZyme | k141_131816 | k141_131816_29 | 54761 | 56383 | - | CBM91 | GH43_10 |
| CAZyme | k141_131816 | k141_131816_30 | 56433 | 57761 | - | CBM6 | GH43_29 |
| CAZyme | k141_131816 | k141_131816_31 | 57797 | 60325 | - | GH31_4 |
| CAZyme | k141_131816 | k141_131816_32 | 60337 | 61086 | - | CE1 |
| CAZyme | k141_131816 | k141_131816_33 | 61198 | 63141 | - | GH97 |
| CAZyme | k141_131816 | k141_131816_34 | 63195 | 65639 | - | GH31_4 |
| CAZyme | k141_131816 | k141_131816_35 | 65665 | 67392 | - | CBM91 | GH43_12 |
| CAZyme | k141_131816 | k141_131816_36 | 67948 | 70533 | - | GH3 |
| pfam | k141_131816 | k141_131816_37 | 70793 | 71998 | + | AAA_14 | DUF4143 |
| sulfatase | k141_131816 | k141_131816_38 | 72107 | 73123 | - | S1_16 |
| TC | k141_131816 | k141_131816_39 | 73148 | 74440 | - | 2.A.1.7.1 |
Gene ID: k141_131816_14
Type: CAZyme
Location: 25353 - 26744 (+)
Type: CAZyme
Location: 25353 - 26744 (+)
Gene ID: k141_131816_15
Type: CAZyme
Location: 26758 - 28080 (+)
Type: CAZyme
Location: 26758 - 28080 (+)
Gene ID: k141_131816_16
Type: CAZyme
Location: 28102 - 30537 (+)
Type: CAZyme
Location: 28102 - 30537 (+)
Gene ID: k141_131816_17
Type: TF
Location: 31107 - 35126 (+)
Type: TF
Location: 31107 - 35126 (+)
Gene ID: k141_131816_18
Type: CAZyme
Location: 35189 - 36019 (-)
Type: CAZyme
Location: 35189 - 36019 (-)
Gene ID: k141_131816_19
Type: CAZyme
Location: 36078 - 36953 (-)
Type: CAZyme
Location: 36078 - 36953 (-)
Gene ID: k141_131816_20
Type: CAZyme
Location: 36960 - 38339 (-)
Type: CAZyme
Location: 36960 - 38339 (-)
Gene ID: k141_131816_21
Type:
Location: 38377 - 38478 (-)
Type:
Location: 38377 - 38478 (-)
Gene ID: k141_131816_22
Type: CAZyme
Location: 38510 - 42061 (-)
Type: CAZyme
Location: 38510 - 42061 (-)
Gene ID: k141_131816_23
Type: pfam
Location: 42091 - 43128 (-)
Type: pfam
Location: 42091 - 43128 (-)
Gene ID: k141_131816_24
Type: pfam
Location: 43160 - 44920 (-)
Type: pfam
Location: 43160 - 44920 (-)
Gene ID: k141_131816_25
Type: TC
Location: 44942 - 47752 (-)
Type: TC
Location: 44942 - 47752 (-)
Gene ID: k141_131816_26
Type: pfam
Location: 47790 - 49610 (-)
Type: pfam
Location: 47790 - 49610 (-)
Gene ID: k141_131816_27
Type: TC
Location: 49624 - 52728 (-)
Type: TC
Location: 49624 - 52728 (-)
Gene ID: k141_131816_28
Type: CAZyme
Location: 52862 - 54580 (-)
Type: CAZyme
Location: 52862 - 54580 (-)
Gene ID: k141_131816_29
Type: CAZyme
Location: 54761 - 56383 (-)
Type: CAZyme
Location: 54761 - 56383 (-)
Gene ID: k141_131816_30
Type: CAZyme
Location: 56433 - 57761 (-)
Type: CAZyme
Location: 56433 - 57761 (-)
Gene ID: k141_131816_31
Type: CAZyme
Location: 57797 - 60325 (-)
Type: CAZyme
Location: 57797 - 60325 (-)
Gene ID: k141_131816_32
Type: CAZyme
Location: 60337 - 61086 (-)
Type: CAZyme
Location: 60337 - 61086 (-)
Gene ID: k141_131816_33
Type: CAZyme
Location: 61198 - 63141 (-)
Type: CAZyme
Location: 61198 - 63141 (-)
Gene ID: k141_131816_34
Type: CAZyme
Location: 63195 - 65639 (-)
Type: CAZyme
Location: 63195 - 65639 (-)
Gene ID: k141_131816_35
Type: CAZyme
Location: 65665 - 67392 (-)
Type: CAZyme
Location: 65665 - 67392 (-)
Gene ID: k141_131816_36
Type: CAZyme
Location: 67948 - 70533 (-)
Type: CAZyme
Location: 67948 - 70533 (-)
Gene ID: k141_131816_37
Type: pfam
Location: 70793 - 71998 (+)
Type: pfam
Location: 70793 - 71998 (+)
Gene ID: k141_131816_38
Type: sulfatase
Location: 72107 - 73123 (-)
Type: sulfatase
Location: 72107 - 73123 (-)
Gene ID: k141_131816_39
Type: TC
Location: 73148 - 74440 (-)
Type: TC
Location: 73148 - 74440 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_131816_31 | vegan > omnivore | 2.93594 | 0.00029 |
| k141_131816_37 | vegetarian > vegan | 1.24995 | 0.02213 |