Cluster: CGMR062874_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR062874
- CGC Family ID: CGCFAM_00256
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_28250 | k141_28250_5 | 3983 | 7030 | + | 1.B.14.6.1 |
| TC | k141_28250 | k141_28250_6 | 7042 | 8664 | + | 8.A.46.1.3 |
| pfam | k141_28250 | k141_28250_7 | 8694 | 9833 | + | SusE |
| CAZyme | k141_28250 | k141_28250_8 | 9846 | 11078 | + | GH76 |
| CAZyme | k141_28250 | k141_28250_9 | 11082 | 12278 | + | GH76 |
| CAZyme | k141_28250 | k141_28250_10 | 12282 | 14654 | + | GH92 |
| TC | k141_28250 | k141_28250_11 | 14733 | 15902 | + | 2.A.1.7.16 |
| STP | k141_28250 | k141_28250_12 | 15866 | 16480 | - | cNMP_binding |
| TC | k141_28250 | k141_28250_13 | 16500 | 17849 | - | 2.A.66.1.37 |
| pfam | k141_28250 | k141_28250_14 | 18002 | 18721 | + | Diphthami_syn_2 |
| TC | k141_28250 | k141_28250_15 | 18736 | 19491 | - | 3.A.1.13.2 |
| TC | k141_28250 | k141_28250_16 | 19488 | 20504 | - | 3.A.1.13.2 |
| TC | k141_28250 | k141_28250_17 | 20501 | 21634 | - | 3.A.1.13.2 |
Gene ID: k141_28250_5
Type: TC
Location: 3983 - 7030 (+)
Type: TC
Location: 3983 - 7030 (+)
Gene ID: k141_28250_6
Type: TC
Location: 7042 - 8664 (+)
Type: TC
Location: 7042 - 8664 (+)
Gene ID: k141_28250_7
Type: pfam
Location: 8694 - 9833 (+)
Type: pfam
Location: 8694 - 9833 (+)
Gene ID: k141_28250_8
Type: CAZyme
Location: 9846 - 11078 (+)
Type: CAZyme
Location: 9846 - 11078 (+)
Gene ID: k141_28250_9
Type: CAZyme
Location: 11082 - 12278 (+)
Type: CAZyme
Location: 11082 - 12278 (+)
Gene ID: k141_28250_10
Type: CAZyme
Location: 12282 - 14654 (+)
Type: CAZyme
Location: 12282 - 14654 (+)
Gene ID: k141_28250_11
Type: TC
Location: 14733 - 15902 (+)
Type: TC
Location: 14733 - 15902 (+)
Gene ID: k141_28250_12
Type: STP
Location: 15866 - 16480 (-)
Type: STP
Location: 15866 - 16480 (-)
Gene ID: k141_28250_13
Type: TC
Location: 16500 - 17849 (-)
Type: TC
Location: 16500 - 17849 (-)
Gene ID: k141_28250_14
Type: pfam
Location: 18002 - 18721 (+)
Type: pfam
Location: 18002 - 18721 (+)
Gene ID: k141_28250_15
Type: TC
Location: 18736 - 19491 (-)
Type: TC
Location: 18736 - 19491 (-)
Gene ID: k141_28250_16
Type: TC
Location: 19488 - 20504 (-)
Type: TC
Location: 19488 - 20504 (-)
Gene ID: k141_28250_17
Type: TC
Location: 20501 - 21634 (-)
Type: TC
Location: 20501 - 21634 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.