Cluster: CGMR062874_CGC50
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR062874
- CGC Family ID: CGCFAM_00297
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_76802 | k141_76802_4 | 2927 | 3508 | - | 9.B.171.1.2 |
| sulfatase | k141_76802 | k141_76802_5 | 3798 | 4895 | + | S1_22 |
| TC | k141_76802 | k141_76802_6 | 4947 | 6257 | + | 2.A.1.7.2 |
| pfam | k141_76802 | k141_76802_7 | 6305 | 7459 | + | GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg |
| CAZyme | k141_76802 | k141_76802_8 | 7590 | 8558 | - | GH43_29 |
| CAZyme | k141_76802 | k141_76802_9 | 8555 | 10537 | - | GH51_2 |
| CAZyme | k141_76802 | k141_76802_10 | 10566 | 12086 | - | GH43_4 |
| TF | k141_76802 | k141_76802_11 | 12263 | 16534 | + | HTH_AraC |
| TC | k141_76802 | k141_76802_12 | 16718 | 19942 | + | 1.B.14.6.1 |
| pfam | k141_76802 | k141_76802_13 | 19982 | 21733 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | k141_76802 | k141_76802_14 | 21766 | 23547 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_76802 | k141_76802_15 | 23582 | 25510 | + | GH43_4 |
| sulfatase | k141_76802 | k141_76802_16 | 25681 | 26820 | + | S1_22 |
| TC | k141_76802 | k141_76802_17 | 26846 | 28540 | + | 2.A.21.3.19 |
Gene ID: k141_76802_4
Type: TC
Location: 2927 - 3508 (-)
Type: TC
Location: 2927 - 3508 (-)
Gene ID: k141_76802_5
Type: sulfatase
Location: 3798 - 4895 (+)
Type: sulfatase
Location: 3798 - 4895 (+)
Gene ID: k141_76802_6
Type: TC
Location: 4947 - 6257 (+)
Type: TC
Location: 4947 - 6257 (+)
Gene ID: k141_76802_7
Type: pfam
Location: 6305 - 7459 (+)
Type: pfam
Location: 6305 - 7459 (+)
Gene ID: k141_76802_8
Type: CAZyme
Location: 7590 - 8558 (-)
Type: CAZyme
Location: 7590 - 8558 (-)
Gene ID: k141_76802_9
Type: CAZyme
Location: 8555 - 10537 (-)
Type: CAZyme
Location: 8555 - 10537 (-)
Gene ID: k141_76802_10
Type: CAZyme
Location: 10566 - 12086 (-)
Type: CAZyme
Location: 10566 - 12086 (-)
Gene ID: k141_76802_11
Type: TF
Location: 12263 - 16534 (+)
Type: TF
Location: 12263 - 16534 (+)
Gene ID: k141_76802_12
Type: TC
Location: 16718 - 19942 (+)
Type: TC
Location: 16718 - 19942 (+)
Gene ID: k141_76802_13
Type: pfam
Location: 19982 - 21733 (+)
Type: pfam
Location: 19982 - 21733 (+)
Gene ID: k141_76802_14
Type:
Location: 21766 - 23547 (+)
Type:
Location: 21766 - 23547 (+)
Gene ID: k141_76802_15
Type: CAZyme
Location: 23582 - 25510 (+)
Type: CAZyme
Location: 23582 - 25510 (+)
Gene ID: k141_76802_16
Type: sulfatase
Location: 25681 - 26820 (+)
Type: sulfatase
Location: 25681 - 26820 (+)
Gene ID: k141_76802_17
Type: TC
Location: 26846 - 28540 (+)
Type: TC
Location: 26846 - 28540 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.