Cluster: CGMR062874_CGC88
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: CGMR062874
- CGC Family ID: CGCFAM_00111
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_114802 | k141_114802_1 | 2 | 2461 | - | 1.B.14.6.1 |
| STP | k141_114802 | k141_114802_2 | 2662 | 3669 | - | FecR |
| TF | k141_114802 | k141_114802_3 | 3677 | 4297 | - | GerE |
| CAZyme | k141_114802 | k141_114802_4 | 4493 | 6697 | - | GH78 |
| CAZyme | k141_114802 | k141_114802_5 | 6863 | 8719 | - | GH141 |
Gene ID: k141_114802_1
Type: TC
Location: 2 - 2461 (-)
Type: TC
Location: 2 - 2461 (-)
Gene ID: k141_114802_2
Type: STP
Location: 2662 - 3669 (-)
Type: STP
Location: 2662 - 3669 (-)
Gene ID: k141_114802_3
Type: TF
Location: 3677 - 4297 (-)
Type: TF
Location: 3677 - 4297 (-)
Gene ID: k141_114802_4
Type: CAZyme
Location: 4493 - 6697 (-)
Type: CAZyme
Location: 4493 - 6697 (-)
Gene ID: k141_114802_5
Type: CAZyme
Location: 6863 - 8719 (-)
Type: CAZyme
Location: 6863 - 8719 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_114802_1 | vegan > omnivore | 1.27264 | 0.00029 |
| k141_114802_2 | vegan > omnivore | 1.15790 | 0.00029 |