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Cluster: CGMR062874_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_110610 k141_110610_7 3530 4711 - PL13
pfam k141_110610 k141_110610_8 4835 5386 - DUF4738
TF k141_110610 k141_110610_9 5534 9058 + HTH_AraC
CAZyme k141_110610 k141_110610_10 9174 11786 + GH147
TC k141_110610 k141_110610_11 11968 14985 + 1.B.14.6.1
TC k141_110610 k141_110610_12 15007 16590 + 8.A.46.1.1
pfam k141_110610 k141_110610_13 16614 18338 + SusE | DUF5111 | DUF5114
CAZyme k141_110610 k141_110610_14 18351 19430 + GH53
CAZyme k141_110610 k141_110610_15 19502 21943 + GH2
Gene ID: k141_110610_7
Type: CAZyme
Location: 3530 - 4711 (-)
Gene ID: k141_110610_8
Type: pfam
Location: 4835 - 5386 (-)
Gene ID: k141_110610_9
Type: TF
Location: 5534 - 9058 (+)
Gene ID: k141_110610_10
Type: CAZyme
Location: 9174 - 11786 (+)
Gene ID: k141_110610_11
Type: TC
Location: 11968 - 14985 (+)
Gene ID: k141_110610_12
Type: TC
Location: 15007 - 16590 (+)
Gene ID: k141_110610_13
Type: pfam
Location: 16614 - 18338 (+)
Gene ID: k141_110610_14
Type: CAZyme
Location: 18351 - 19430 (+)
Gene ID: k141_110610_15
Type: CAZyme
Location: 19502 - 21943 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_110610_12 vegan > omnivore 1.98269 0.00029
k141_110610_12 vegetarian > omnivore 1.22560 0.00993

🧭 Explore Read Mapping of CGC

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