Cluster: CGMR062874_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: CGMR062874
- CGC Family ID: CGCFAM_00219
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_110610 | k141_110610_28 | 40501 | 42720 | + | PL12_2 |
| pfam | k141_110610 | k141_110610_29 | 42739 | 44940 | + | SGBP_BT4661-like |
| TC | k141_110610 | k141_110610_30 | 44967 | 48122 | + | 1.B.14.6.1 |
| TC | k141_110610 | k141_110610_31 | 48169 | 49815 | + | 8.A.46.1.3 |
| CAZyme | k141_110610 | k141_110610_32 | 50003 | 50692 | + | GH88 |
Gene ID: k141_110610_28
Type: CAZyme
Location: 40501 - 42720 (+)
Type: CAZyme
Location: 40501 - 42720 (+)
Gene ID: k141_110610_29
Type: pfam
Location: 42739 - 44940 (+)
Type: pfam
Location: 42739 - 44940 (+)
Gene ID: k141_110610_30
Type: TC
Location: 44967 - 48122 (+)
Type: TC
Location: 44967 - 48122 (+)
Gene ID: k141_110610_31
Type: TC
Location: 48169 - 49815 (+)
Type: TC
Location: 48169 - 49815 (+)
Gene ID: k141_110610_32
Type: CAZyme
Location: 50003 - 50692 (+)
Type: CAZyme
Location: 50003 - 50692 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_110610_30 | vegan > omnivore | 1.30705 | 0.00029 |
| k141_110610_31 | vegan > omnivore | 1.61436 | 0.00029 |
| k141_110610_31 | vegetarian > omnivore | 1.33946 | 0.00993 |