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Cluster: CGMR062874_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_105129 k141_105129_4 1702 3702 + GH13_14
TF k141_105129 k141_105129_5 3711 7847 - HTH_AraC
TC k141_105129 k141_105129_6 8241 11414 + 1.B.14.6.1
pfam k141_105129 k141_105129_7 11434 13080 + SusD_RagB | SusD-like_3
pfam k141_105129 k141_105129_8 13095 14498 + SGBP_B_XBD
CAZyme k141_105129 k141_105129_9 14523 16745 + GH10
CAZyme k141_105129 k141_105129_10 17081 18727 + CE20 | CE20
TC k141_105129 k141_105129_11 18750 20234 + 2.A.2.3.6
CAZyme k141_105129 k141_105129_12 20260 21396 + GH10
CAZyme k141_105129 k141_105129_13 21472 22449 + GH43_1
CAZyme k141_105129 k141_105129_14 22460 24601 + GH67
TC k141_105129 k141_105129_15 24732 26186 + 3.A.1.131.2
TC k141_105129 k141_105129_16 26303 28168 - 2.A.21.9.2
TF k141_105129 k141_105129_17 28615 29118 + GerE
STP k141_105129 k141_105129_18 29189 30250 + FecR
TC k141_105129 k141_105129_19 30270 33863 + 1.B.14.6.1
Gene ID: k141_105129_4
Type: CAZyme
Location: 1702 - 3702 (+)
Gene ID: k141_105129_5
Type: TF
Location: 3711 - 7847 (-)
Gene ID: k141_105129_6
Type: TC
Location: 8241 - 11414 (+)
Gene ID: k141_105129_7
Type: pfam
Location: 11434 - 13080 (+)
Gene ID: k141_105129_8
Type: pfam
Location: 13095 - 14498 (+)
Gene ID: k141_105129_9
Type: CAZyme
Location: 14523 - 16745 (+)
Gene ID: k141_105129_10
Type: CAZyme
Location: 17081 - 18727 (+)
Gene ID: k141_105129_11
Type: TC
Location: 18750 - 20234 (+)
Gene ID: k141_105129_12
Type: CAZyme
Location: 20260 - 21396 (+)
Gene ID: k141_105129_13
Type: CAZyme
Location: 21472 - 22449 (+)
Gene ID: k141_105129_14
Type: CAZyme
Location: 22460 - 24601 (+)
Gene ID: k141_105129_15
Type: TC
Location: 24732 - 26186 (+)
Gene ID: k141_105129_16
Type: TC
Location: 26303 - 28168 (-)
Gene ID: k141_105129_17
Type: TF
Location: 28615 - 29118 (+)
Gene ID: k141_105129_18
Type: STP
Location: 29189 - 30250 (+)
Gene ID: k141_105129_19
Type: TC
Location: 30270 - 33863 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_105129_5 vegan > omnivore 1.14801 0.00029
k141_105129_5 vegetarian > omnivore 1.27199 0.00993
k141_105129_7 vegan > omnivore 1.34833 0.00029
k141_105129_7 vegetarian > omnivore 1.47289 0.00993
k141_105129_8 vegan > omnivore 1.12675 0.00029
k141_105129_9 vegan > omnivore 1.38550 0.00029
k141_105129_9 vegetarian > omnivore 1.52565 0.00993
k141_105129_10 vegan > omnivore 1.01538 0.00029
k141_105129_12 vegetarian > omnivore 1.44387 0.00717
k141_105129_13 vegetarian > omnivore 1.19949 0.00701
k141_105129_17 vegan > omnivore 1.55812 0.00029
k141_105129_17 vegetarian > omnivore 2.01052 0.00701

🧭 Explore Read Mapping of CGC

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