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Genome Details

Selected Rep_genome_ID: CGMR054096
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
Alistipes
→
Species
Alistipes sp944321195
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR054096 2,645,637 92.79% 0.48% China Asia CGMR
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
CGMR054096_CGC13 CGCFAM_00005 Yes 11 7
CGMR054096_CGC24 CGCFAM_00016 Yes 5 1 host glycan
CGMR054096_CGC14 CGCFAM_00095 Yes 6 4
CGMR054096_CGC4 CGCFAM_00110 Yes 7 4 pectin/host glycan
CGMR054096_CGC11 CGCFAM_00118 Yes 10 5
CGMR054096_CGC25 CGCFAM_00152 Yes 9 3
CGMR054096_CGC10 CGCFAM_00331 Yes 12 4 alginate
CGMR054096_CGC18 CGCFAM_00492 Yes 4 2
CGMR054096_CGC16 CGCFAM_00524 Yes 4 1
CGMR054096_CGC30 CGCFAM_00540 Yes 8 5 pectin
CGMR054096_CGC7 CGCFAM_00697 Yes 4 1
CGMR054096_CGC32 CGCFAM_01056 Yes 3 1
CGMR054096_CGC15 CGCFAM_01496 Yes 10 5
CGMR054096_CGC8 CGCFAM_01605 Yes 5 1
CGMR054096_CGC28 CGCFAM_02066 Yes 4 1
CGMR054096_CGC34 CGCFAM_02171 Yes 11 1
CGMR054096_CGC29 CGCFAM_02756 Yes 9 2
CGMR054096_CGC21 CGCFAM_03098 Yes 10 6
CGMR054096_CGC27 CGCFAM_03398 Yes 25 15
CGMR054096_CGC19 CGCFAM_03850 Yes 7 5
CGMR054096_CGC26 CGCFAM_04754 Yes 7 3
CGMR054096_CGC3 CGCFAM_05228 Yes 13 6
CGMR054096_CGC9 CGCFAM_05660 Yes 6 2
CGMR054096_CGC22 CGCFAM_08388 Yes 3 1
Top CAZyme Families