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Cluster: CGMR054096_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_21563 k141_21563_3 5247 7121 + GH110
CAZyme k141_21563 k141_21563_4 7124 8986 + GH110
CAZyme k141_21563 k141_21563_5 9012 10124 + GH43_24
TC k141_21563 k141_21563_6 10178 13255 + 1.B.14.6.1
pfam k141_21563 k141_21563_7 13268 14878 + SusD_RagB | SusD-like_3
pfam k141_21563 k141_21563_8 14897 16012 + Fib_succ_major
CAZyme k141_21563 k141_21563_9 16032 17735 + GH136
pfam k141_21563 k141_21563_10 17751 19898 + Fib_succ_major | SusE | SusE
sulfatase k141_21563 k141_21563_11 19957 21171 + S1_16
CAZyme k141_21563 k141_21563_12 21168 22745 + GH20
Gene ID: k141_21563_3
Type: CAZyme
Location: 5247 - 7121 (+)
Gene ID: k141_21563_4
Type: CAZyme
Location: 7124 - 8986 (+)
Gene ID: k141_21563_5
Type: CAZyme
Location: 9012 - 10124 (+)
Gene ID: k141_21563_6
Type: TC
Location: 10178 - 13255 (+)
Gene ID: k141_21563_7
Type: pfam
Location: 13268 - 14878 (+)
Gene ID: k141_21563_8
Type: pfam
Location: 14897 - 16012 (+)
Gene ID: k141_21563_9
Type: CAZyme
Location: 16032 - 17735 (+)
Gene ID: k141_21563_10
Type: pfam
Location: 17751 - 19898 (+)
Gene ID: k141_21563_11
Type: sulfatase
Location: 19957 - 21171 (+)
Gene ID: k141_21563_12
Type: CAZyme
Location: 21168 - 22745 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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