Cluster: CGMR054096_CGC27
🧬 Cluster Details
- Gene Count: 25
- CAZyme Count: 15
- Substrate:
- Genome ID: CGMR054096
- CGC Family ID: CGCFAM_03398
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_74719 | k141_74719_13 | 14681 | 18931 | + | GT3 | GT35 |
| CAZyme | k141_74719 | k141_74719_14 | 19044 | 21125 | + | GH133 |
| CAZyme | k141_74719 | k141_74719_15 | 21368 | 22687 | + | GT4 |
| CAZyme | k141_74719 | k141_74719_16 | 22700 | 23914 | + | GH57 |
| NULL(UNKNOWN) | k141_74719 | k141_74719_17 | 23959 | 24564 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | k141_74719 | k141_74719_18 | 24667 | 25194 | + | C56.UNW |
| CAZyme | k141_74719 | k141_74719_19 | 25253 | 27130 | - | GH20 |
| NULL(UNKNOWN) | k141_74719 | k141_74719_20 | 27178 | 28680 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_74719 | k141_74719_21 | 28848 | 30296 | - | Mfa2 | Mfa_like_1 |
| CAZyme | k141_74719 | k141_74719_22 | 30335 | 32629 | - | GH28 |
| CAZyme | k141_74719 | k141_74719_23 | 32629 | 34119 | - | GH28 |
| CAZyme | k141_74719 | k141_74719_24 | 34124 | 35857 | - | GH5_38 |
| CAZyme | k141_74719 | k141_74719_25 | 35880 | 36749 | - | CBM32 |
| TC | k141_74719 | k141_74719_26 | 36779 | 38629 | - | 8.A.46.1.3 |
| TC | k141_74719 | k141_74719_27 | 38651 | 41764 | - | 1.B.14.6.1 |
| pfam | k141_74719 | k141_74719_28 | 42055 | 42900 | + | Metallophos |
| pfam | k141_74719 | k141_74719_29 | 42937 | 43779 | - | Exo_endo_phos |
| CAZyme | k141_74719 | k141_74719_30 | 43776 | 45779 | - | GH65 |
| pfam | k141_74719 | k141_74719_31 | 45846 | 46982 | - | DUF5009 |
| CAZyme | k141_74719 | k141_74719_32 | 46998 | 48593 | - | GH20 |
| CAZyme | k141_74719 | k141_74719_33 | 48701 | 51031 | - | GH3 |
| TF | k141_74719 | k141_74719_34 | 51186 | 55325 | - | HTH_AraC |
| CAZyme | k141_74719 | k141_74719_35 | 55485 | 57782 | + | GH3 |
| CAZyme | k141_74719 | k141_74719_36 | 57897 | 59834 | + | GH127 |
| CAZyme | k141_74719 | k141_74719_37 | 59875 | 61593 | + | GH123 |
Gene ID: k141_74719_13
Type: CAZyme
Location: 14681 - 18931 (+)
Type: CAZyme
Location: 14681 - 18931 (+)
Gene ID: k141_74719_14
Type: CAZyme
Location: 19044 - 21125 (+)
Type: CAZyme
Location: 19044 - 21125 (+)
Gene ID: k141_74719_15
Type: CAZyme
Location: 21368 - 22687 (+)
Type: CAZyme
Location: 21368 - 22687 (+)
Gene ID: k141_74719_16
Type: CAZyme
Location: 22700 - 23914 (+)
Type: CAZyme
Location: 22700 - 23914 (+)
Gene ID: k141_74719_17
Type:
Location: 23959 - 24564 (+)
Type:
Location: 23959 - 24564 (+)
Gene ID: k141_74719_18
Type: peptidase
Location: 24667 - 25194 (+)
Type: peptidase
Location: 24667 - 25194 (+)
Gene ID: k141_74719_19
Type: CAZyme
Location: 25253 - 27130 (-)
Type: CAZyme
Location: 25253 - 27130 (-)
Gene ID: k141_74719_20
Type:
Location: 27178 - 28680 (-)
Type:
Location: 27178 - 28680 (-)
Gene ID: k141_74719_21
Type: pfam
Location: 28848 - 30296 (-)
Type: pfam
Location: 28848 - 30296 (-)
Gene ID: k141_74719_22
Type: CAZyme
Location: 30335 - 32629 (-)
Type: CAZyme
Location: 30335 - 32629 (-)
Gene ID: k141_74719_23
Type: CAZyme
Location: 32629 - 34119 (-)
Type: CAZyme
Location: 32629 - 34119 (-)
Gene ID: k141_74719_24
Type: CAZyme
Location: 34124 - 35857 (-)
Type: CAZyme
Location: 34124 - 35857 (-)
Gene ID: k141_74719_25
Type: CAZyme
Location: 35880 - 36749 (-)
Type: CAZyme
Location: 35880 - 36749 (-)
Gene ID: k141_74719_26
Type: TC
Location: 36779 - 38629 (-)
Type: TC
Location: 36779 - 38629 (-)
Gene ID: k141_74719_27
Type: TC
Location: 38651 - 41764 (-)
Type: TC
Location: 38651 - 41764 (-)
Gene ID: k141_74719_28
Type: pfam
Location: 42055 - 42900 (+)
Type: pfam
Location: 42055 - 42900 (+)
Gene ID: k141_74719_29
Type: pfam
Location: 42937 - 43779 (-)
Type: pfam
Location: 42937 - 43779 (-)
Gene ID: k141_74719_30
Type: CAZyme
Location: 43776 - 45779 (-)
Type: CAZyme
Location: 43776 - 45779 (-)
Gene ID: k141_74719_31
Type: pfam
Location: 45846 - 46982 (-)
Type: pfam
Location: 45846 - 46982 (-)
Gene ID: k141_74719_32
Type: CAZyme
Location: 46998 - 48593 (-)
Type: CAZyme
Location: 46998 - 48593 (-)
Gene ID: k141_74719_33
Type: CAZyme
Location: 48701 - 51031 (-)
Type: CAZyme
Location: 48701 - 51031 (-)
Gene ID: k141_74719_34
Type: TF
Location: 51186 - 55325 (-)
Type: TF
Location: 51186 - 55325 (-)
Gene ID: k141_74719_35
Type: CAZyme
Location: 55485 - 57782 (+)
Type: CAZyme
Location: 55485 - 57782 (+)
Gene ID: k141_74719_36
Type: CAZyme
Location: 57897 - 59834 (+)
Type: CAZyme
Location: 57897 - 59834 (+)
Gene ID: k141_74719_37
Type: CAZyme
Location: 59875 - 61593 (+)
Type: CAZyme
Location: 59875 - 61593 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp944321195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.