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Cluster: CGMR054096_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_104023 k141_104023_25 27053 30295 - 1.B.14.6.1
CAZyme k141_104023 k141_104023_26 30597 31820 - GH105
TF k141_104023 k141_104023_27 31817 36217 - HTH_AraC | HTH_AraC
CAZyme k141_104023 k141_104023_28 36373 38055 - CE12 | CE8
CAZyme k141_104023 k141_104023_29 38068 39825 - PL1_2
CAZyme k141_104023 k141_104023_30 39855 41549 - GH28
pfam k141_104023 k141_104023_31 41652 42827 - DUF4861
CAZyme k141_104023 k141_104023_32 42829 44235 - CE19
Gene ID: k141_104023_25
Type: TC
Location: 27053 - 30295 (-)
Gene ID: k141_104023_26
Type: CAZyme
Location: 30597 - 31820 (-)
Gene ID: k141_104023_27
Type: TF
Location: 31817 - 36217 (-)
Gene ID: k141_104023_28
Type: CAZyme
Location: 36373 - 38055 (-)
Gene ID: k141_104023_29
Type: CAZyme
Location: 38068 - 39825 (-)
Gene ID: k141_104023_30
Type: CAZyme
Location: 39855 - 41549 (-)
Gene ID: k141_104023_31
Type: pfam
Location: 41652 - 42827 (-)
Gene ID: k141_104023_32
Type: CAZyme
Location: 42829 - 44235 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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