Family: CGCFAM_00540
Members:
15
(Labeled: 2, Unlabeled: 13)
In Labeled Fam:
YES
Substrates:
Pectin
| Gene Cluster ID ▲ | Gene Count | CAZyme Count | Substrate | Domain | Phylum | Class | Order | Family | Genus | Species |
|---|---|---|---|---|---|---|---|---|---|---|
| PUL0191 | 11 | 5 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides xylanisolvens |
| PUL0191_A43.bin_3_C0 | 10 | 5 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides xylanisolvens |
| CGMR003500_CGC19 | 7 | 4 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Rikenellaceae | Alistipes | Alistipes muris |
| CGMR042976_CGC41 | 6 | 4 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | UBA932 | Cryptobacteroides | Cryptobacteroides sp900760425 |
| CGMR054096_CGC30 | 8 | 5 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Rikenellaceae | Alistipes | Alistipes sp944321195 |
| CGMR081123_CGC1 | 4 | 3 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Rikenellaceae | Tidjanibacter | Tidjanibacter sp017390585 |
| HRGMv2_0130_CGC2 | 9 | 5 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Rikenellaceae | Alistipes | Alistipes sp900541585 |
| HRGMv2_0177_CGC39 | 17 | 8 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides sp900762525 |
| HRGMv2_0380_CGC44 | 4 | 2 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Rikenellaceae | Alistipes | Alistipes megaguti |
| HRGMv2_0538_CGC25 | 6 | 4 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Rikenellaceae | Alistipes | Alistipes montrealensis |
| HRGMv2_3874_CGC5 | 11 | 5 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Rikenellaceae | Alistipes | Alistipes sp944321185 |
| HRGMv2_3876_CGC30 | 6 | 1 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Muribaculaceae | UBA7173 | |
| HRGMv2_3877_CGC3 | 13 | 6 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Rikenellaceae | Alistipes | Alistipes cottocaccae |
| MGYG000003099_CGC26 | 5 | 4 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Barnesiellaceae | UMGS27 | UMGS27 sp900538555 |
| Rep_616_CGC21 | 7 | 4 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Rikenellaceae | Alistipes | Alistipes senegalensis |
Showing 1 to 15 of 15 entries
Gene Count Distribution
CAZyme Count Distribution
Gene Clusters by Phylum
Gene Count vs. CAZyme Count
Family Taxonomic Lineage
Family Distribution
Family Network
How to explore the network:
- Hover over a node to see detailed info about that CGC.
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Network legend:
node: CGC
edge: the CGCs share similarity (Jaccard index ≥ 0.5)
edge label: CGC similarity score (Jaccard index score)
node: CGC
edge: the CGCs share similarity (Jaccard index ≥ 0.5)
edge label: CGC similarity score (Jaccard index score)