dbCAN Logo

Cluster: Rep_616_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_616_c_4 Rep_616_c_4_81 94372 96051 + GH28
CAZyme Rep_616_c_4 Rep_616_c_4_82 96060 97916 + PL1_2
CAZyme Rep_616_c_4 Rep_616_c_4_83 97941 99560 + CE12 | CE8
TF Rep_616_c_4 Rep_616_c_4_84 99609 103988 + HTH_AraC | HTH_AraC
CAZyme Rep_616_c_4 Rep_616_c_4_85 103985 105214 + GH105
TC Rep_616_c_4 Rep_616_c_4_86 105550 108786 + 1.B.14.6.1
TC Rep_616_c_4 Rep_616_c_4_87 108815 110704 + 8.A.46.1.3
Gene ID: Rep_616_c_4_81
Type: CAZyme
Location: 94372 - 96051 (+)
Gene ID: Rep_616_c_4_82
Type: CAZyme
Location: 96060 - 97916 (+)
Gene ID: Rep_616_c_4_83
Type: CAZyme
Location: 97941 - 99560 (+)
Gene ID: Rep_616_c_4_84
Type: TF
Location: 99609 - 103988 (+)
Gene ID: Rep_616_c_4_85
Type: CAZyme
Location: 103985 - 105214 (+)
Gene ID: Rep_616_c_4_86
Type: TC
Location: 105550 - 108786 (+)
Gene ID: Rep_616_c_4_87
Type: TC
Location: 108815 - 110704 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List